Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00791 ATGCACATGATGGACATATTCAGTATTACCAAGAGGCTTTATCACAGTGCCCTGCTTAACTTTCTCCTCTGCATTATTATAGTTTCAGAAACCTTAGTGAACAAGCCAACTACGAGTGCTGGCCTGCGCTTGGGATCAGAGACTGATAGACTTGCTCTGCTGGCCGTGAAGGACAAACTAACTAGGGGCTTGCCTGAAGCTCTGCCTTCATGGAATGATTCTCTCCACTTCTGTGAGTGGCATGGTGTTATATGCAGTTCCCATCACATGAGAGTCGCTGCGTTGGATTTGACAGACCAAAATTTTGGTGGCACTATTGCACCTGCCTTGGGAAATTTGACCTTCCTTAAATTGTTGAATCTTTCTCTTGACAACTTACATGGTAGGATTCCCAAAGAAATCGGCCGTCTAAAGAGGTTGCAGCGTATCAACTTAAGTGGAAATAATCTTGAGGGTGAGATTCCTAAAGAGCTCACAAATTGCTCAAAACTTGAgtttattaacttttattcaaataacCTCACAGGTAGAGTTCCCATCAGGCTAGGATCTATGAAGCATCtcacttatttttctcttggtACCAATAACCTAGTTGGAACTATCCCACCTTCCTTGGGAAACCTTTCATCATTgaacattttgattttttcatataatcaTTTGGAAGGAATTTTACCTCATTCCCTGGGATTGTTGTCAAATCTGAAGGTGCTTTATGTGGgagttaattttttgtctGGTTTAGTCCCTCCTTCCATCTACAATCTTTCAAACATAGAACGCATTGATCTGTCTGACAACCACATTGAGGGTGCCCTTCCATCAAATATCGACCTTCTTTTTCCTAAGCTTGAAAGTTTTAGTTTTGCACTAAACGTCTTTACAGGTACCATTCCTTCTTCCATAACCAACATCtccaatttaaaaatatttgatttcgTTGGTTGTCGTTTTAGTGGGCCAACTCCTACTACTTTTGGAAGACTGAAGTACCTTCAAGCGTTAGACATGGACTTCAATAATTTAGGAAGTGGAAGAGATAGTGATCTggattttctttcatctttaacCAACTGTAGTCAATTGCAAATGCTGACTTTTCAGGGCAATCGATTTGGGGGTGCACTGCCAGATTTAATCGGCAATTTTTCTGCCCATCTCAGTATTCTTCTAATGGGAGAAAATCAGATATCTGGAACTATACCTGAAGCTATTGGGCAGCTAGTTGGCTTAACTTTTCTTGATATGGAATTCAACTTGCTTGAGGGTACAATTCCTGTTTCAATTGGAAAGCTTAAAAATCTTGGAAGAGTGTTCTTTAGAGTAAACAGATTATCTGGTAATATCCCTTATTCCATTGGAAATCTTAGTATGTTATTTGATCTTCATTTGAACAATAACACTTTAGAAGGAGGCATTCCACTTTCCCTTAGCTACTGTACAAATATGCAGCATCTGAATCTGTCTCAAAACAACTTAAGTGGTAATATACCCCACCAAATATTTGCTCGTCAACAAAGTTTGATAACCCTTGACTTGTCTCTTAATTCCTTGATTGGTCCTGTTCCATCAGAATTTGGCAAGATGAAGCAGCTTGGAAAGTTATATCTTCAGGAAAACTTGTTGTCTGGGGGTATTCCCTCACAGCTTGGTGAATGTTCTGGGTTAGAAGAACTTGTAATGAGTGGTAACCTATTGAATGGAAGCATTCCTTCATCTTTTGGCTCTTTAAAATCCCTAGAAATCTTAGATCTTTCTAGGAACAACTTATCAGGCACAATCCCTGCTGAACTTGGAAATCTTTCAATGTCgaagaaattaaacttgtCTTTCAACCATCTGCATGGTGAGATTCCATTTGGGGGAGTGTTTAGTAACATCACTGCACTTTCACTCTATGGAAATGAGGATCTTTGTGGTGGGATTCCTCAACTGAAACTGCCTGCATGCCCTGTCATACACTTGAAAAAAGCCAAGAAGCCTCTACATTTGAAAGTTATCCTCATTATTGTAGTTACTGGGGCGTTCCTGTGTTCTGTAATTTCcatcattatattatacataaccaaaaaaccaaaaaggtaCTCCACTGCCACTTCTTCGGAAAATAGGTTCTTGATGGTTTCTTATGTTGAGCTTCATGCAGCAACCAATGGATTTTCTTCAACCAATTTAATTGGCACTGGGAGTTTTGGCTCTGTTTACAAAGGAACTCTGAGCTGTTTCAGCAGACCTATTGCTGTGAAAGTACTAAATCTTCAAACACGAGGGTCATCAAAAAGTTTTGTGGCTGAATGCAGAGCTTTGGCCAGAGTTCGACATAGAAATCTTGTGAAAATCGTTACTTGTTGCTCAAGTATTGACTACAAGGGTGCAGATTTCAAAGCATTGGTCTTTGAATTCATGCCTAATGGAAGTTTGGAAAATTGGTTGCACAATCAAGAACTGTCTGAGTCCGAGAATCAAAATCTGAACCTCATACAAAGGTTAGATGTAGCAATTGATATTGCTCAAGCCTTGGATTATCTTCACAATGATTCGGAGGAAGTAATTGTTCATTGTGACATAAAGCccaataacatttttcttgatgCCGACATGGTTGCTCACTTGGGAGACTTTGGGCTAGCTAGGCTCCTTGTTGAGACTAAAGGCAATGCCAGAAGAGCGCAAGCCACATCCTCTATAGTAAAGGGAACTATTGGATATATTCCCCCAGAATATGGAATGGGTAGTACAGTTTCAACGAAGGGTGATATTTATAGCTATGGAATTCTTTTGCTGGAGATGATCGTAGGAAGGAAACCTACTGATAGCATGTTTAGTGAGAATCTAAGCCTTCACAAGACGTGTAAGATGGCATTGCTAGAAGGACTTATTGAACAAGTTGATCCACATTTGCTTGTCCAATCTGATGATGCATATATGGATGCTCTGGTGTCCTTTGCTAGGATTGGAGTTGCATGTTCTTCAGAATTTCCTTATGAGCGGATGGGCATCAAAGATGTTATAGTGGAGTTGCTTGCAATTAAAAAGAGGTTGTCTTGTCCACAAGGTATCACAATTGTCTcccaaaatta 3083 0.3782 MHMMDIFSITKRLYHSALLNFLLCIIIVSETLVNKPTTSAGLRLGSETDRLALLAVKDKLTRGLPEALPSWNDSLHFCEWHGVICSSHHMRVAALDLTDQNFGGTIAPALGNLTFLKLLNLSLDNLHGRIPKEIGRLKRLQRINLSGNNLEGEIPKELTNCSKLEFINFYSNNLTGRVPIRLGSMKHLTYFSLGTNNLVGTIPPSLGNLSSLNILIFSYNHLEGILPHSLGLLSNLKVLYVGVNFLSGLVPPSIYNLSNIERIDLSDNHIEGALPSNIDLLFPKLESFSFALNVFTGTIPSSITNISNLKIFDFVGCRFSGPTPTTFGRLKYLQALDMDFNNLGSGRDSDLDFLSSLTNCSQLQMLTFQGNRFGGALPDLIGNFSAHLSILLMGENQISGTIPEAIGQLVGLTFLDMEFNLLEGTIPVSIGKLKNLGRVFFRVNRLSGNIPYSIGNLSMLFDLHLNNNTLEGGIPLSLSYCTNMQHLNLSQNNLSGNIPHQIFARQQSLITLDLSLNSLIGPVPSEFGKMKQLGKLYLQENLLSGGIPSQLGECSGLEELVMSGNLLNGSIPSSFGSLKSLEILDLSRNNLSGTIPAELGNLSMSKKLNLSFNHLHGEIPFGGVFSNITALSLYGNEDLCGGIPQLKLPACPVIHLKKAKKPLHLKVILIIVVTGAFLCSVISIIILYITKKPKRYSTATSSENRFLMVSYVELHAATNGFSSTNLIGTGSFGSVYKGTLSCFSRPIAVKVLNLQTRGSSKSFVAECRALARVRHRNLVKIVTCCSSIDYKGADFKALVFEFMPNGSLENWLHNQELSESENQNLNLIQRLDVAIDIAQALDYLHNDSEEVIVHCDIKPNNIFLDADMVAHLGDFGLARLLVETKGNARRAQATSSIVKGTIGYIPPEYGMGSTVSTKGDIYSYGILLLEMIVGRKPTDSMFSENLSLHKTCKMALLEGLIEQVDPHLLVQSDDAYMDALVSFARIGVACSSEFPYERMGIKDVIVELLAIKKRLSCPQGITIVSQN 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00791 1027 Gene3D Ribonuclease Inhibitor 281 347 IPR032675 -
Bva03g00791 1027 SUPERFAMILY RNI-like 283 621 - -
Bva03g00791 1027 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 47 1017 - -
Bva03g00791 1027 ProSitePatterns Protein kinases ATP-binding region signature. 727 750 IPR017441 GO:0005524
Bva03g00791 1027 SUPERFAMILY Protein kinase-like (PK-like) 695 1008 IPR011009 -
Bva03g00791 1027 Pfam Leucine rich repeat 556 615 IPR001611 GO:0005515
Bva03g00791 1027 Pfam Leucine rich repeat 483 543 IPR001611 GO:0005515
Bva03g00791 1027 SUPERFAMILY L domain-like 47 343 - -
Bva03g00791 1027 Pfam Leucine Rich Repeat 235 257 IPR001611 GO:0005515
Bva03g00791 1027 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515
Bva03g00791 1027 ProSiteProfiles Protein kinase domain profile. 721 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00791 1027 Gene3D Ribonuclease Inhibitor 45 195 IPR032675 -
Bva03g00791 1027 Gene3D Ribonuclease Inhibitor 196 280 IPR032675 -
Bva03g00791 1027 Gene3D Ribonuclease Inhibitor 348 652 IPR032675 -
Bva03g00791 1027 Gene3D Transferase(Phosphotransferase) domain 1 803 1019 - -
Bva03g00791 1027 Pfam Protein kinase domain 723 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00791 1027 Pfam Leucine rich repeat N-terminal domain 47 86 IPR013210 -
Bva03g00791 1027 Gene3D Phosphorylase Kinase; domain 1 685 802 - -
Bva03g00791 1027 PANTHER LRR RECEPTOR-LIKE KINASE 47 1017 - -
Bva03g00791 1027 SMART LRR_typ_2 209 232 IPR003591 -
Bva03g00791 1027 SMART LRR_typ_2 257 281 IPR003591 -
Bva03g00791 1027 SMART LRR_typ_2 137 161 IPR003591 -
Bva03g00791 1027 SMART LRR_typ_2 409 433 IPR003591 -
Bva03g00791 1027 SMART LRR_typ_2 530 554 IPR003591 -
Bva03g00791 1027 SMART LRR_typ_2 481 505 IPR003591 -
Bva03g00791 1027 SMART LRR_typ_2 578 602 IPR003591 -
Bva03g00791 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Bva03g00791 1027 SMART serkin_6 721 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00791 Bva-Chr3 4844077 4847414 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00791 47 1015 Receptor kinase-like Gene Family AT3G47570 43.611 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva03g00791 Pkinase 8.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00791 - - gsj:114384365 1093.57