Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00787 ATGAAGCAGCTTGTGGAGTTATATCTTAATGAAAACAAGTTGTCTGGGGATATTCCCGCAGAGCTTGGTGAATGTTCTGGGTTAGAAGCACTTGTAATGAGTGGTAACCAATTGAATGGAAGCATTCCTTCATCTTTTGGCTCTTTAAAATCCCTAGAAATCTTAGATCTTTCTAGGAACAACTTATCAGGCATAATCCCCGCTGAACTTAGAAATCTTTCAATGTTGAACAACTTGAACTTGTCTTTCAACCATCTGCATGGTGAGATTCCATTTGGGGGAGTGTTTAGTAACATCACTGCACTTTCACTCTATGGAAATGAGGATCTTTGTGGTGGGATTCCTCAACTAAAATTGCTTGCATGCCCTGTCATACACTTGAAAAAACCCAAGAAGCCTCTACATTTGAAAGTTATCCTCATTATTATAGTTACTGGGGCGTTCCTGTGTTCTGTAATTTCcatcattatattatacatgaccaaaaaaccaaaaaggtaCTCCACTGCCACTTCTTCGGAAAATAGGTTCTTGATGGTTTCTTATGTTGAGCTTCATGAAGCAACCAATGGATTTTGTTCAACCAATTTAATTGGCACAGGGAGTTTTGGCTCTGTTTACAAAGGAACTCTGAGCTGTTTCAGCAGACCTATTGCTGTGAAAGTACTAAATCTTCAAACACGTGGATCATCAAAAAGTTTTGTGGCGGAATGCAGAGCTTTGGCCAGAGTTCGACATAGAAATCTTGTGAAAATCCTTACTTGTTGCTCAAGTGTTGACTACATGGGTGCAGATTTCAAAGCATTGGTCTTTGAATTCATGCCTAATGGAAGTTTGGAAAATTGGTTGCACAATCAAGAACTATCTGAGTCCGAGAATCAAAATCTGAACCTCATACAAAGGTTAGATGTAGCATTTGATATTGCTCAAGCCTTGGATTATCTTCACAATGATTTGGAGGAAGTAATTATTCATTGTGACATAAAACCCAacaacatttttcttgatGTGGACATGGTTGCTCACTTGGGAGACTTTGGGCTGGCTAGGCTCCTTGATGAGACTGAAGGCAATGTTAGTAGAGAGCAAGCCACATCCTCTACAGTAAAAGGAACCGTTGGCTATATTCCCCCAGAATATGGAATGGGCGGTACATTTTCAGCAAAGGGTGATATTTATAGTTATGGAATTCTTTTGTTGGAGATGATCATAGGAAAGAAACCAACTGATAACATGTTCAGTGAGAATTTGAGCCTTCACAAAATGTGTAAGATGGCATTGCCAGAAGGACTTATTGAGCGAGTTGATCCACATTTGCTTGTCCAATCTTATGATACATATAGGGAAGCTCTAGTGTCGTTAGCTAAGATTGGAGTTGCTTGTTCTTCAGAATTGCCTAGTGAGCGAACAGGCATAAAAGATGTTATAGTGGAGTTGCTTGCAATCAAAAGGAGTCTATCTTGTTCATA 1469 0.3826 MKQLVELYLNENKLSGDIPAELGECSGLEALVMSGNQLNGSIPSSFGSLKSLEILDLSRNNLSGIIPAELRNLSMLNNLNLSFNHLHGEIPFGGVFSNITALSLYGNEDLCGGIPQLKLLACPVIHLKKPKKPLHLKVILIIIVTGAFLCSVISIIILYMTKKPKRYSTATSSENRFLMVSYVELHEATNGFCSTNLIGTGSFGSVYKGTLSCFSRPIAVKVLNLQTRGSSKSFVAECRALARVRHRNLVKILTCCSSVDYMGADFKALVFEFMPNGSLENWLHNQELSESENQNLNLIQRLDVAFDIAQALDYLHNDLEEVIIHCDIKPNNIFLDVDMVAHLGDFGLARLLDETEGNVSREQATSSTVKGTVGYIPPEYGMGGTFSAKGDIYSYGILLLEMIIGKKPTDNMFSENLSLHKMCKMALPEGLIERVDPHLLVQSYDTYREALVSLAKIGVACSSELPSERTGIKDVIVELLAIKRSLSCS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00787 489 Gene3D Transferase(Phosphotransferase) domain 1 274 488 - -
Bva03g00787 489 PRINTS Leucine-rich repeat signature 52 65 - -
Bva03g00787 489 PRINTS Leucine-rich repeat signature 73 86 - -
Bva03g00787 489 Pfam Leucine rich repeat 43 86 IPR001611 GO:0005515
Bva03g00787 489 SUPERFAMILY Protein kinase-like (PK-like) 166 479 IPR011009 -
Bva03g00787 489 SMART LRR_typ_2 49 72 IPR003591 -
Bva03g00787 489 SMART LRR_typ_2 73 98 IPR003591 -
Bva03g00787 489 SMART LRR_typ_2 1 25 IPR003591 -
Bva03g00787 489 ProSitePatterns Protein kinases ATP-binding region signature. 198 221 IPR017441 GO:0005524
Bva03g00787 489 SMART serkin_6 192 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00787 489 ProSiteProfiles Leucine-rich repeat profile. 51 72 IPR001611 GO:0005515
Bva03g00787 489 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 488 - -
Bva03g00787 489 Gene3D Ribonuclease Inhibitor 1 126 IPR032675 -
Bva03g00787 489 ProSiteProfiles Protein kinase domain profile. 192 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00787 489 PANTHER LRR RECEPTOR-LIKE KINASE 1 488 - -
Bva03g00787 489 SUPERFAMILY L domain-like 2 111 - -
Bva03g00787 489 CDD STKc_IRAK 198 479 - -
Bva03g00787 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Bva03g00787 489 Gene3D Phosphorylase Kinase; domain 1 155 273 - -
Bva03g00787 489 Pfam Protein kinase domain 196 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00787 Bva-Chr3 4763832 4767316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00787 3 91 Receptor kinase-like Gene Family AT3G47580 46.067 4.94e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva03g00787 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00787 - - ccaj:109813865 577.4