Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00785 ATGAGTGGAAACTTCTTCCAAGGAAGTATTCCTTCATCATTTGGTAATTTAAAATCCCTAGAAATCTTAGATCTTTCTAGGAACAACTTATCAGGCATAATCCCCTATGAATTGAGAAACCTTTCAAGATTGAAGAGCTTGAACTTGTCTTTCAACCATTTGCATGGTGAGGTTCCAACTGGTGGGGTGTTTAGTAACACTACTGCGCTTTCACTCCATGGAAATGAGGACTTTTGTGGTGGGATACCTCAACTCAAAATGCCTGCATGCCCTGTCTTACACTTAAAGAAACACAAGAAGCCTCTACAGTTGAAAGTTATCCTCATTATTGTAGTTACTGGGGTGTTGCTTTGTACTATAGCTTCtgtcattatattatatatgatgaaaaaaccaaaaaggttATCTTCTGGAACTTCTAATTTGGAAGATAGGCTCTTGATGGTTTCTTATGGTGAGCTTTATGAAGCAACCAATGGATTTTCTTCAACCAATTTAATTGGCACAGGGGGTTTTGGCTCTGTATACAAAGGAACTCTTAGATGTTTCAACAAACCTGTTGCTGTGAAGGTTCTAAATCTTCAAACACGTGGGGCATCAAAAAGTTTTGTGGTTGAATGCAGAGCTTTGGCTAAAGTTCGACATAGAAATCTTATGAAGATTCTAACTTGTTGCTCAAGTATTGACTACAAGGGTGCCGATTTCAAAGCGCTGGTATTTGAATTCATGCCTAACGGGAGTCTGGAGAACTGGTTGCACAATGAGGAACAGCCAGATTCAGGGGATCTAAATCTAAACCTCAGACAAAGGTTAAATGTAGCTATTGATATAGCTCAAGCATTGGATTATCTTCACAGTGGTTGTATGGAAATAATTGTTCATTGTGATATAAAACCCAGCAACATTTTTCTTGATGATGACATGGTTGCTCACCTGGGGGACTTTGGGCTAGCTAGGCTCCTTGACGAGGATAAGGGCAATGGCAATAGAGAGCAAGCCACATCCTCTTTAGTAAAGGGAACCATTGGATATATTCCCCCAGAATATGGAATGGGTGGTACAGTTTCAGCTGAGGGTGATATTTATAGCTATGGAATTCTTTTGTTGGAGATGATCACAGGAAAGAAACCGACTGATAACATGTTCAGTGAGAATTTGAGCCTTCATAATATGTGTAAGATGACATTGTCAGAAGGACTTATTGAGCAAGTTGATCCACTTTTGCAAGTAAAATCTGATAATACAATTAGGGAGGCTCTAGTGTCCTTTGCTAGGATTGGAGTTGCGTCTTCTTCAGAAATTCCCAGTGAACGAATGGGCATAAAAGATGTTATAATGGAGTTGCTTGCAATCAATAGGAGGCTGTCTTGTCTACAAGGTATCAAAGTTGTCACCCAAAATTA 1403 0.3863 MSGNFFQGSIPSSFGNLKSLEILDLSRNNLSGIIPYELRNLSRLKSLNLSFNHLHGEVPTGGVFSNTTALSLHGNEDFCGGIPQLKMPACPVLHLKKHKKPLQLKVILIIVVTGVLLCTIASVIILYMMKKPKRLSSGTSNLEDRLLMVSYGELYEATNGFSSTNLIGTGGFGSVYKGTLRCFNKPVAVKVLNLQTRGASKSFVVECRALAKVRHRNLMKILTCCSSIDYKGADFKALVFEFMPNGSLENWLHNEEQPDSGDLNLNLRQRLNVAIDIAQALDYLHSGCMEIIVHCDIKPSNIFLDDDMVAHLGDFGLARLLDEDKGNGNREQATSSLVKGTIGYIPPEYGMGGTVSAEGDIYSYGILLLEMITGKKPTDNMFSENLSLHNMCKMTLSEGLIEQVDPLLQVKSDNTIREALVSFARIGVASSSEIPSERMGIKDVIMELLAINRRLSCLQGIKVVTQN 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00785 467 SMART serkin_6 161 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00785 467 Gene3D Transferase(Phosphotransferase) domain 1 243 460 - -
Bva03g00785 467 ProSiteProfiles Leucine-rich repeat profile. 19 40 IPR001611 GO:0005515
Bva03g00785 467 PRINTS Leucine-rich repeat signature 20 33 - -
Bva03g00785 467 PRINTS Leucine-rich repeat signature 41 54 - -
Bva03g00785 467 SMART LRR_typ_2 41 66 IPR003591 -
Bva03g00785 467 SMART LRR_typ_2 17 40 IPR003591 -
Bva03g00785 467 ProSiteProfiles Protein kinase domain profile. 161 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00785 467 Gene3D Ribonuclease Inhibitor 1 97 IPR032675 -
Bva03g00785 467 CDD STKc_IRAK 167 448 - -
Bva03g00785 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Bva03g00785 467 PANTHER LRR RECEPTOR-LIKE KINASE 11 457 - -
Bva03g00785 467 ProSitePatterns Protein kinases ATP-binding region signature. 167 190 IPR017441 GO:0005524
Bva03g00785 467 Pfam Leucine rich repeat 3 54 IPR001611 GO:0005515
Bva03g00785 467 Gene3D Phosphorylase Kinase; domain 1 141 242 - -
Bva03g00785 467 SUPERFAMILY L domain-like 1 79 - -
Bva03g00785 467 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 457 - -
Bva03g00785 467 Pfam Protein kinase domain 163 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00785 467 SUPERFAMILY Protein kinase-like (PK-like) 144 408 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00785 Bva-Chr3 4728483 4732007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00785 1 84 Receptor kinase-like Gene Family AT3G47570 37.647 1.09e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva03g00785 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00785 - - ahf:112766492 553.132