Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00782 ATGCAGAACGAGGAGGGACAAATTACAGAGCTTTACATTCCAAGGAAATGTTCTGCGACTAATCGCCTGATCACTTCTAAGGACCATGCTTCTGTCCAGATTAACGTTGGGCATTTGGATGAGAATGGTATCTACAATGGCCACTTCTCCGCATTTGCCCTCTGTGGCTTTATTCGTGCTCAGGGGGATGCCGACAGCGCATTAGATAGACTCTggcagaagaagaaagttgaGCTATCCTTTGATGTATGGTGCTGTGGCTGTCCCCAGAATTCTCCAGCCAAGTATTGCTTGAGGAATATGGTGCACCTACCCAACTTTGTTAGTCAATtgatgtctagcatagatcaAGGAACACTTTCAAACAAACCTGAAACTCAACAATA 386 0.4093 MQNEEGQITELYIPRKCSATNRLITSKDHASVQINVGHLDENGIYNGHFSAFALCGFIRAQGDADSALDRLWQKKKVELSFDVWCCGCPQNSPAKYCLRNMVHLPNFVSQLMSSIDQGTLSNKPETQQ 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00782 128 Gene3D - 1 80 IPR038579 -
Bva03g00782 128 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bva03g00782 128 PANTHER 40S RIBOSOMAL PROTEIN S21 1 79 - -
Bva03g00782 128 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Bva03g00782 128 PANTHER 40S RIBOSOMAL PROTEIN S21 1 79 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00782 Bva-Chr3 4709810 4711309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00782 1 78 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 84.615 1.88e-49 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00782 K02971 - gmx:100817753 158.688