Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00770 ATGGCTGGGCGAGGTAAGAATAAAAGCTTAGAGAGCTTATTGGACATGGACAAACGAGGAACTGCAAAAATAGTTAAGCAACCGAAACCTCAGAAACCGATTCCCAGCCGTGGCCTTGAATTCAGTGACCTCTCATACAGTATcataaagaagcaaaagaaggaTGGAATTTGGATCAAGAGAGAAGCATACCTTCTTCATGAAATCTCTGGCCAGGCAATGAGAGGAGAAGTTATGGCAATCATGGGGCCTAGTGGTGCTGGCAAATCAACCCTTCTTGATGCCTTGGCCGGGCGAATTGCACAAGGGAGTCTAGAGGGATTAGTTAGAATTGATGGAAAGCCAGTGACAACAAGTTACATGAAGATGGTGTCATCATACGTGATGCAAGATGACCAACTCTTTCCTATGTTGACAGTTTTTGAGACATTAATGTTTTCAGCTGAGGTTAGACTTCCCCCTTCCATTTCAAgggaggaaaagaagaaaagggtcTTTGAGCTCATTGATCAACTAGGCTTGCAGAGTGCaacacatacatatattgGTGATGAGGGAAGGAGAGGAGTCTCAGGAGGCGAGCGGCGAAGAGTATCTATTGGCGTAGACATCATCCATAAACCATCACTTCTGTTTCTTGATGAACCAACCTCAGGTCTTGATTCTACCAGTGCTTACAGTGTGGTGGAAAAGGTTAGGGACATAGCTCAAGGTGGCAGCGTCGTCCTTATGACCATACATCAACCTTCATATAGAATTCAACTGCTCCTGGACCGTGTCACCATCCTAGCAAGGGGAAGACTAATATACATGGGAAGACCAGGTGCACTTAGTGATCACCTCTCTGGATTTGGAAGGCCAGTTCCAGATGGAGAAAACTGCTTTGAATATCTTTTagatattataaaagaatatgatGAATCAACAGTTGGGCTAGACCCCCTTGTGATGTACCAACAAGATGGCCTCAAACCAGACCAATCAACACTGACACCTGTTCCTAGAACACCAAAAACTCCAAGGACAGCTTACAGAAGGAACACACCCGTATCCAAACACATGTTTAGCCTGCGCAGCCAAAGATTTTCTTCTGAAACACCTAAACCTGATTCTGCACAGTTTGGTTATGACGAGGGAGAGGATGATGACGAGAATTTTGATTACTCACTTGAAAGGAGAACTGCTCAAACACCAAGGAACAAGAATAGTAGTGTCCAACCACGTTTAGCTTCTCAGTTCTACAAAGAATTCTCAGCCAGAGATTTCTCTGTTTGGCTTTACCAGGGTGTGTTAGGAACCCCTCGTCGCGCACCATCTTGGACTCCATCTAGAACTCCAGGAATGAGATCACTTTCAGGAACAAGGAGTGGAATCTCCGGCTCATATTCTGCATCTTATCGCGCGAAAACCCCTACTATTGAGAATGTAAGCCAATCCATTGAGTACTCCTATCCTGCAACCTCCTATGAAGATATTGAGATTGAAGAAGTCCTTGATGAGCCACACCTTGGATCCAAGTATGCTAATCCATGGATGCGTGAGGTTGCTGTCCTGTCTTGGCGAACAGCTCTAAATGTAATTCGCACACCAGAACTCTTCCTCTCCCGTGAGATTGTGCTTGCTGTTATGGCTCTTATTCTGTCCTCCATTTTCAGGAAACTAGCTGATCGTACTATTGTAAACATCAACAAACTTCTCAATTTCTACATCTTTGCAGTGTGCCTTGTGTTCTTCTCCTCCAATGATGCAGTCCCAACTTTCATACTGGAAAGGTTCATCTTCATGAGAGAGACTTCCCACAATGCTTATCGTTCTTCCTCTTATGTCATTTCTTCACTCATTGTCTATCTTCCGTTCTTCGCTATTCAAGGATTCACATTTGCTGCCATAACCAAATTACTACTCCACCTGAAAAGCagtatcttctttttctggatGACCCTTTATGCTTCGCTGATTACCACCAATGCTTATGTTATGCTTGTAAGTGCACTTGTTCCAAGTTACATCACAGGGTATGCTGTAGTCATAGCCACCACagctctcttctttctcactTGTGGCTTCTTCCTCAAGCGAACCGAGATACCCATCTACTGGAAGTGGCTACACTATATTTCTGCAATCAAATACCCATTTGAGGCATTGCTGACAaatgaattcaagaatgatGAATGCTACACAGGGAACCTTAGAGATTTATCTCCTGGACCATTAGGAAATATTGATTTCAGTGAGCGCCATAGACAATTGAATGCATCTTGCTTGATTGGAGAAGATGTTTTGTCCTCCATGAAACTTCAAATGGAAAACATATGGTATGACATCTTAATCCTGCTGGCCTGGGGTGTTCTTTACAggttcttgttttatttggttttgagattttattcCAAGAACGAGAGAAAATG 2411 0.4098 MAGRGKNKSLESLLDMDKRGTAKIVKQPKPQKPIPSRGLEFSDLSYSIIKKQKKDGIWIKREAYLLHEISGQAMRGEVMAIMGPSGAGKSTLLDALAGRIAQGSLEGLVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETLMFSAEVRLPPSISREEKKKRVFELIDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGVDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVRDIAQGGSVVLMTIHQPSYRIQLLLDRVTILARGRLIYMGRPGALSDHLSGFGRPVPDGENCFEYLLDIIKEYDESTVGLDPLVMYQQDGLKPDQSTLTPVPRTPKTPRTAYRRNTPVSKHMFSLRSQRFSSETPKPDSAQFGYDEGEDDDENFDYSLERRTAQTPRNKNSSVQPRLASQFYKEFSARDFSVWLYQGVLGTPRRAPSWTPSRTPGMRSLSGTRSGISGSYSASYRAKTPTIENVSQSIEYSYPATSYEDIEIEEVLDEPHLGSKYANPWMREVAVLSWRTALNVIRTPELFLSREIVLAVMALILSSIFRKLADRTIVNINKLLNFYIFAVCLVFFSSNDAVPTFILERFIFMRETSHNAYRSSSYVISSLIVYLPFFAIQGFTFAAITKLLLHLKSSIFFFWMTLYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTEIPIYWKWLHYISAIKYPFEALLTNEFKNDECYTGNLRDLSPGPLGNIDFSERHRQLNASCLIGEDVLSSMKLQMENIWYDILILLAWGVLYRFLFYLVLRFYSKNERK 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00770 803 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 797 - -
Bva03g00770 803 Pfam ABC transporter 66 218 IPR003439 GO:0005524
Bva03g00770 803 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524
Bva03g00770 803 MobiDBLite consensus disorder prediction 352 370 - -
Bva03g00770 803 MobiDBLite consensus disorder prediction 323 384 - -
Bva03g00770 803 MobiDBLite consensus disorder prediction 438 457 - -
Bva03g00770 803 MobiDBLite consensus disorder prediction 436 457 - -
Bva03g00770 803 CDD ABCG_EPDR 39 272 - -
Bva03g00770 803 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 290 IPR003439 GO:0005524
Bva03g00770 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 281 IPR027417 -
Bva03g00770 803 Gene3D - 39 283 IPR027417 -
Bva03g00770 803 PANTHER ABC TRANSPORTER 4 797 - -
Bva03g00770 803 Pfam ABC-2 type transporter 515 721 IPR013525 GO:0016020|GO:0140359
Bva03g00770 803 SMART AAA_5 75 275 IPR003593 -
Bva03g00770 803 MobiDBLite consensus disorder prediction 323 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00770 Bva-Chr3 4605343 4608414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00770 76 272 Calmodulin-binding Proteins AT2G36910 26.500 3.92e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00770 K05681 - gmx:100819497 1217.6