Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00746 ATGTGGATGGTGGGTTATGAAAGTGGTGATTTCAACATGGCTGATCATTCTTTCAATGGAAGGAAACTGAGGCCTCTCATTCCAAGGCCTAACAGTAACACTTCATCTACAAACCCTCCTTCCTTAACCCGTATTCATGGCACCGATTTCTTCTCACAATATCACAATCTGGCGTCAGTGGCAGAGCAGGGCAAGAAAGAATTGAATAACTCACCAGTTGTGGTGAGTTCAAGGTGGAATCCAACACCGGAGCAGCTAAGAGCCCTTGAAGAATTGTATCGAAGAGGGACCAGAACACCATCTGCAGAACAAATTCAGCATATCACTGCACAGCTTAGGAGATTTGGTAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAGGCCAGAGAAAGGCAGAAACGACGCCGTCAAATGGAATCTGCTGCTGAGGGTGGCCACCCCCGTGATTTTGATAGTCTAGACAAGAAAGACTTGGGTGCAAGTAGGACAGTGTTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTATTCTTGCAGAGGAATCTGTCTCAATACAAAGGGCAGCAAAAGCAGCCGTAGCAGAGTGTAGAACAGATGGATGGATCCAATTCGATGAAGGGGAATTAcaacaaagaagaaactttATGGAAAGGAATGCCACGTGGCACATGATGCAGCTATCTTGTCCTCATCCTCCTCCTGCTACTGACACCACCCACCTCATAAACACACCTCCTAATGCCTCTATAACTAGTATTGCTACTACAACTACTGTGACAACAAGAGCAATGGACCCAAAGCTCATTAAGACTCATGATCTCAGCTTCTTTATTTCTCCCCACAGAGCAAATGGAGTTGTCCACTTAAACAGTCTTAGAAGTGAAGAAGATCGTAACTGTGTGGAATCACAAACCCTTCAGCTTTTCCCATTAAGGAGTGGGGATGGCAGTGATAACATTAATCAAAAGCAGACAGACATATCAGCTTCAGCAATGAATGCCAACTTGACCCCAAGCCAGTTTTTTGAGTTCCTCCCACTGAAGAACTA 1073 0.4399 MWMVGYESGDFNMADHSFNGRKLRPLIPRPNSNTSSTNPPSLTRIHGTDFFSQYHNLASVAEQGKKELNNSPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGGHPRDFDSLDKKDLGASRTVFEVEQTKNWAPSTNCSILAEESVSIQRAAKAAVAECRTDGWIQFDEGELQQRRNFMERNATWHMMQLSCPHPPPATDTTHLINTPPNASITSIATTTTVTTRAMDPKLIKTHDLSFFISPHRANGVVHLNSLRSEEDRNCVESQTLQLFPLRSGDGSDNINQKQTDISASAMNANLTPSQFFEFLPLKN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00746 357 Gene3D - 74 136 - -
Bva03g00746 357 SMART HOX_1 74 141 IPR001356 GO:0003677
Bva03g00746 357 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 10 357 IPR044555 GO:0003700|GO:0099402
Bva03g00746 357 MobiDBLite consensus disorder prediction 138 159 - -
Bva03g00746 357 MobiDBLite consensus disorder prediction 135 159 - -
Bva03g00746 357 PANTHER WUSCHEL, PUTATIVE-RELATED 10 357 - -
Bva03g00746 357 SUPERFAMILY Homeodomain-like 77 143 IPR009057 -
Bva03g00746 357 Pfam Homeodomain 77 136 IPR001356 GO:0003677
Bva03g00746 357 CDD homeodomain 78 138 IPR001356 GO:0003677
Bva03g00746 357 ProSiteProfiles 'Homeobox' domain profile. 82 137 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00746 Bva-Chr3 4459449 4462269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00746 1 357 Wox Gene Family AT3G18010 40.921 1.59e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva03g00746 Homeodomain 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00746 - - gmx:100777274 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00879 04 5777754 5779971 Bva03g00746 03 4459449 4462269 ECH
Bva03g00746 03 4459449 4462269 Bva03g00746 03 4459449 4462269 ECH