Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00737 ATGCTGGATTCAACTGGTACAGAGTCAAAGCCGAAGAAAAAGGGTAGCGTATATATGGGTGGTGGAGGCACACTGGTGGACGGTATTCGTCGCCTGTTTCAACGTCGCACTTCTGTTGCTAATAAGTTTGATGATCAAGATTATATTACcaatgatgataataataatgatgatgacGTTGATTTCAACTCTAAGAGACTCGCGTCTGTAAGAGATTTGCGCTCTCGATTGTCTGCTTTTCCTAAACAGGAAAGAGAGGAAGGTGAGAGAGAAGAGCTCAAGATCGAAGAGGACTTTGATATCTCTGGATTGAAGCTTATCAAAGTACCTACACGGACCCACTTCAAGGCTGGTTTCATGGATCCCCAAAAGAAGGGTGGTCTAGAAACAGACTTCTTCACCGAGTATGGAGAAGCAAGTAGATACGAAGTCCAAGAAGTTGTTGGAAAAGGAAGTTATGGTGTTGTGGGTTCTGCCGTTGACACTCATACTGGGGAAAAGGTtgcaattaagaaaattaatgatgttTTTGAGCATGTCTCAGATGCCACACGGATTCTAAGGGAAATTAAGCTCCTTCGGTTGCTCCGACATCCTGATATTGTACAAATTAAGCATATAATGCTTCCTCCTTCACGAAGAGAGTTCAAGGACATCTATGTCGTGTTTGAATTAATGGAATCTGACCTCCATCAAGTAATTAAGGCAAATGACGATCTTACTCCTGAGCACCACCAATTTTTCTTATACCAACTTCTTCGAGGcctaaaatatatacattcagCAAATGTGTTTCACCGTGACTTAAAGCCAAAAAATATCCTTGCTAATGCTGATTGCAAACTAAAGATATGTGATTTTGGGCTTGCTCGAGTTTCCTTTAATGATGCTCCATCAGCTATATTCTGGACCGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTggttcttttttctcaaaaTATACCCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGTTGTCTGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTGATGACAGATTTGCTTGGTACTTCTCCTCCTGAATCCATTTCAAAGattcgAAATGAGAAGGCCAGAAGGTATCTTAGTAACATGCGGAAAAAGCCACCAGTTCCATTTTCCCAAAAGTTCCCTAATGCAGATCCAATGGTTCTTCCTTTGCTGGAACGCCTACTTGCATTTGATCCTAAAGATCGGCCAACAGCTGAAGAGGCTTTAAGTGACCCTTATTTCTATGGTTTGTCAAATGTGGATCGTGAACCATTATCCACTCAACCCATTTCAAAACTCGAGTTCGAGTTTGAGAGAAGGAAATTGGGCAAAGATGACGTCAGAGAATTGATTTATCGAGAGATTCTAGAGTATCATCCCCAGATGCTGCAGGAATATCTTCGTGGTGGAGAGCAGACCAGCTTCGTGTATCCAAGTGGGGTTGATCGGTTCAAGAAACAGTTTGCACATCTTGAGGAGCATTATGGCAAGGGTGAAAAAACCACTCCGTTGCTGAGACACCATGTTTCCTTACCTAGACAGCGAGTTCCTGATCCCAAGGATGGAGATACTAACAATGCTATTGAGAATCTGCCAAATTCTGATGGGGTTGATGCTGGAAACTCAGATGCACAAAATGGATCCTCCAATCAAGCTACACGCAGCCTGTTGAAGTGTGCCAGCATTAGTGCTTCAAAGTGTATAGGAGTGAAACAAAGTAAAGAACCAGAGGAGGAGCCATTCGCGGAGGAGACCGATGAGGGAGTAGATGGGTTGACAGAGAAGGTTGCTGTCCTCCATGCCTA 1862 0.4146 MLDSTGTESKPKKKGSVYMGGGGTLVDGIRRLFQRRTSVANKFDDQDYITNDDNNNDDDVDFNSKRLASVRDLRSRLSAFPKQEREEGEREELKIEEDFDISGLKLIKVPTRTHFKAGFMDPQKKGGLETDFFTEYGEASRYEVQEVVGKGSYGVVGSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVQIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTSPPESISKIRNEKARRYLSNMRKKPPVPFSQKFPNADPMVLPLLERLLAFDPKDRPTAEEALSDPYFYGLSNVDREPLSTQPISKLEFEFERRKLGKDDVRELIYREILEYHPQMLQEYLRGGEQTSFVYPSGVDRFKKQFAHLEEHYGKGEKTTPLLRHHVSLPRQRVPDPKDGDTNNAIENLPNSDGVDAGNSDAQNGSSNQATRSLLKCASISASKCIGVKQSKEPEEEPFAEETDEGVDGLTEKVAVLHA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00737 620 SMART serkin_6 142 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00737 620 SUPERFAMILY Protein kinase-like (PK-like) 138 438 IPR011009 -
Bva03g00737 620 MobiDBLite consensus disorder prediction 587 611 - -
Bva03g00737 620 Gene3D Phosphorylase Kinase; domain 1 158 480 - -
Bva03g00737 620 MobiDBLite consensus disorder prediction 545 569 - -
Bva03g00737 620 ProSiteProfiles Protein kinase domain profile. 142 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00737 620 MobiDBLite consensus disorder prediction 518 569 - -
Bva03g00737 620 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 101 564 - -
Bva03g00737 620 MobiDBLite consensus disorder prediction 518 541 - -
Bva03g00737 620 Pfam Protein kinase domain 142 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00737 620 Gene3D Transferase(Phosphotransferase) domain 1 228 457 - -
Bva03g00737 620 ProSitePatterns MAP kinase signature. 177 280 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bva03g00737 620 MobiDBLite consensus disorder prediction 1 24 - -
Bva03g00737 620 ProSitePatterns Protein kinases ATP-binding region signature. 148 172 IPR017441 GO:0005524
Bva03g00737 620 CDD STKc_TDY_MAPK 141 479 - -
Bva03g00737 620 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 101 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00737 Bva-Chr3 4401935 4406963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00737 127 620 MAP Kinase Gene Family AT3G18040 79.093 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bva03g00737 Pkinase 2.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00737 - - zju:107434116 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00869 04 5708850 5713307 Bva03g00737 03 4401935 4406963 ECH
Bva03g00737 03 4401935 4406963 Bva03g00737 03 4401935 4406963 ECH