Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00731 ATGAGAAAGCCTTGCTgtaaggaagaagaaagtaatAAAGGATGTTGGTCCAAGCAAGAGGACCAGAAACTCATGGACTACATCAAAGCACACGGTGAAGGCCGCTGGCGTTCAATTCCTCATGCTgcagGGTTACGCCGTTGCGGCAAAAGCTGCCGGTTGAGGTGGCTGAACTATCTAAAGCCTGGAGTTAAACATGGAGACTttggagaagatgaagaagaccTAATCATCAGGCTTCATGCTCTTCTTGGCAACCGATGGGCGCTGATAGCTGGAAGATTGCCAGGACGGACAGACAATGAAGTCAAGAATTACTGGAATTGCCACATCAGGAAAAAGCTGATACACATGGGGCATGATCTCAATAATCTTCATGGATTTAGAAGTTCTGTCCTTGCTCCTTTCAAGTCAATTGGGCCCAAAATTAATGAGGTTCCTGAGTGCAATATCAACAGTTTTCCTGACTTGAATCTTGATCTGACACTGGGCACTTCCTCCGAGGAAAAGGAAGCACTTCAAGATTG 527 0.4231 MRKPCCKEEESNKGCWSKQEDQKLMDYIKAHGEGRWRSIPHAAGLRRCGKSCRLRWLNYLKPGVKHGDFGEDEEDLIIRLHALLGNRWALIAGRLPGRTDNEVKNYWNCHIRKKLIHMGHDLNNLHGFRSSVLAPFKSIGPKINEVPECNINSFPDLNLDLTLGTSSEEKEALQD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00731 175 SUPERFAMILY Homeodomain-like 12 107 IPR009057 -
Bva03g00731 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Bva03g00731 175 PANTHER MYB TRANSCRIPTION FACTOR 2 125 - -
Bva03g00731 175 CDD SANT 71 111 IPR001005 -
Bva03g00731 175 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 125 - -
Bva03g00731 175 Pfam Myb-like DNA-binding domain 67 108 IPR001005 -
Bva03g00731 175 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bva03g00731 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Bva03g00731 175 SMART sant 12 62 IPR001005 -
Bva03g00731 175 SMART sant 65 113 IPR001005 -
Bva03g00731 175 CDD SANT 16 60 IPR001005 -
Bva03g00731 175 Gene3D - 13 65 - -
Bva03g00731 175 Gene3D - 68 126 - -
Bva03g00731 175 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bva03g00731 175 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00731 Bva-Chr3 4371277 4372620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00731 2 121 MYB Transcription Factor Family AT4G38620 69.167 1.09e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g00731 Myb_DNA-binding 7.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00731 K09422 - qsu:111990468 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00731 03 4371277 4372620 Bva03g00731 03 4371277 4372620 ECH