Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00719 ATGGATATCGAGGAGGACATCCGTGCTTTACAGCTTGATTCTGCAGAAGATAACAACGGGGTTGTAAATCCAGAGAATGCCAAGCTAGaagaagttgagaaatctgATAAGATGGTTGAAGATCCAAAGGAGGAAGTTCAGGCACAGCCTGTCCAGACTGAGGCAAAAGTGAAAGATAAGGAAGTCTCCTCTGTGGGAGACaaggaggaagaggaggaaTTAAACAGGAAAAGACACTTGAATGTTGTGTTTATTGGTCATGTTGATGCCGGTAAGTCTACAACTGGAGGCCAGATACTTTTCCTTAGTGGTCAGGTTGATGAACGTACTatccaaaagtatgagaaaGAAGCTAAGGACAAAAGTAGGGAGAGCTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAAAGGGTGAAGGGCAAAACAGTTGAAGTTGGAAGAGCATATTTTGAAACAGAGACAACAAGGTTTACTATTTTGGATGCACCTGGTCACAAAAGTTATGTTCCCAACATGATTAGTGGTGCATCTCAAGCTGACATAGGAGTATTGGTAATTTCTGCTCGGAAGGGAGAATTTGAAACGGGATATGAGAGAGGTGGACAGACCAGGGAACATGTCCAGCTTGCAAAAACTTTGGGTGTGGCTAAGCTACTTGTTGTTGTGAATAAAATGGATGATCCTACAGTGAAGTGGTCAAAAGAAAGGTATGATGAAATTGAAGGAAAGATGATTCCATTTCTGAAGTCGTCGGGGTATAATGTGAAGAAAGgttctGTTTTATATTGGTGTACTACTAGGTATGATGAAATTGAAGGAAAGATGATTCCATTTCTGAAGTCGTCGGATGTTCTCTTCTTACCTCTATCTGGTCTGGTTGGTTTAAACATGAAAACAAGAGTGGATAAAAGTGTTTGTTCATGGTGGAATGGTCCCTGCCTCTTTGAAGCTCTTGATGCCGTTGAAATTCCCCTTCGAGATCCCAAAGGTCCTTTcagGATGCCTATAATTGACAAATTTAAAGACATGGGAACTGTTGTTATGGGCAAAGTGGAGTCTGGTAGTGTTCGAGAGGGGGATTCCTTGTTGGTCATGCCAAATAAGGTTCCAGTAAAAGTTCAGGCAGTATTTATTGATGAAGATAGGGTTAAGCGTGCTGGACCTGGTGAAAATTTACGAATTAGAATATCTGgtgttgaagaagaagacatAGTTTCTGGGTTTGTTTTGTCAAGTGtttCAAATCCAATACCAGCTGTTACTGAGTTTGTAGCTCAACTGCAGATCCTTGAACTGTTGGACAATGCTATTTTTACTGCTGGGTATAAGGCTGTTCTACATATCCACTCTATAGTTGAAGAATGTGAGATTGTTGAGCTCTTACAGCAAATTGATCCAAGGACAAAGAAAcctatgaagaagaaaattctctTTGTGAAGAATGGTGCTGTTGTTGTATGCCGTGTTCAGGTTATTAGCTCGATATGTATAGAGAAGTTCTCTGATTTTCCCCAACTTGGGAGGTTCACTCTTCGTACTGAAGGAAAAACTGTTGCTGTGGGAAAAGTAACTGGtgttta 1586 0.3834 MDIEEDIRALQLDSAEDNNGVVNPENAKLEEVEKSDKMVEDPKEEVQAQPVQTEAKVKDKEVSSVGDKEEEEELNRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAYFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDDPTVKWSKERYDEIEGKMIPFLKSSGYNVKKDVLFLPLSGLVGLNMKTRVDKSVCSWWNGPCLFEALDAVEIPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSLLVMPNKVPVKVQAVFIDEDRVKRAGPGENLRIRISGVEEEDIVSGFVLSSVSNPIPAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSIVEECEIVELLQQIDPRTKKPMKKKILFVKNGAVVVCRVQVISSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00719 503 Pfam Elongation factor Tu GTP binding domain 77 282 IPR000795 GO:0003924|GO:0005525
Bva03g00719 503 PRINTS GTP-binding elongation factor signature 81 94 IPR000795 GO:0003924|GO:0005525
Bva03g00719 503 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Bva03g00719 503 PRINTS GTP-binding elongation factor signature 220 229 IPR000795 GO:0003924|GO:0005525
Bva03g00719 503 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Bva03g00719 503 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Bva03g00719 503 Gene3D Translation factors 306 391 - -
Bva03g00719 503 CDD eRF3_C_III 395 501 - -
Bva03g00719 503 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 77 306 IPR000795 GO:0003924|GO:0005525
Bva03g00719 503 Pfam Elongation factor Tu domain 2 321 387 IPR004161 GO:0005525
Bva03g00719 503 Pfam Elongation factor Tu C-terminal domain 394 503 IPR004160 -
Bva03g00719 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 312 IPR027417 -
Bva03g00719 503 CDD EF1_alpha 81 301 - -
Bva03g00719 503 Gene3D Translation factors 393 503 - -
Bva03g00719 503 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 397 502 IPR009001 -
Bva03g00719 503 MobiDBLite consensus disorder prediction 1 73 - -
Bva03g00719 503 CDD eRF3_II 308 389 - -
Bva03g00719 503 PANTHER BNAA06G12300D PROTEIN 2 497 - -
Bva03g00719 503 SUPERFAMILY Translation proteins 301 393 IPR009000 -
Bva03g00719 503 PANTHER TRANSLATION FACTOR 2 497 - -
Bva03g00719 503 Gene3D - 57 301 IPR027417 -
Bva03g00719 503 MobiDBLite consensus disorder prediction 54 73 - -
Bva03g00719 503 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00719 Bva-Chr3 4287942 4302582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00719 77 503 Eukaryotic Initiation Factors Gene Family AT5G60390 38.140 1.98e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00719 K03267 - gmx:100784412 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00719 03 4287942 4302582 Bva03g00719 03 4287942 4302582 ECH