Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00707 ATGAGTGGAGGTAGCACCCAGCCTGGTTGTGGAAATGGCGACTCGGACGTTAGCCCTGAGGGTCCCAATACTTACCTTAATCCCAAGAGGGAAGCTGATTTAGAAACCCCTGATTTGACGGCGAAGAAGTTGAGAACTGAAGCTGGGAGTGCGGATAATGCGGCAGGCTGTGAAGAAGCTCGAAACCCACTGGTCGTTTCTGATAAAGTTGACAAGGGCAACGAGGCAGACCAACAAACTCGCGATTCCGACAATACAAGGGAACTGGCTTTTGAGATTGAAGCGGATGCGGCTGAGGATAAAGGGTCTAGGCATTCCATGGAGGACGCCTGGGTGGTGCTTTTGGACGCCAGCTTAGATCACCCTGGAAAattgagATGCGCACATTTTGCAATCTATGATGGACACGGAGGACGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGGAAATGTTCTTTCATCAGGATTACCACGTGAGTTGTTGGATACAAAGGCAGCTAAAAGAGCCATACTCGATGGTTTTCGTAAAACTGATGATTCTCTTCTTCAAGAAAGTGCAGCAGGGGGATGGCAGGATGGTGCTACTGCTGTATGTGTTTGGGTATTGGGGCAAAAAGTTTTTGTTGCAAACGTAGGAGATGCCAAAGCAGTTTTAGCTCGCTCAACTTTACCTGATGGGTCCCAAAACCCCTCAGATGTAGTCCATTCCCTGAAGGCCATTGTTTTGACAAGGGAACACAAAGCAATCTACCCACAAGAGCGTGCTCGCATCCAGAAGGCTGGCGGTGTTGTGAGCTCAAATGGACGACTACAAGGGCGTCTAGAAGTTTCAAGGGCTTTTGGAGATCGCCAGTTCAAAAAGGTGGGCGTTGTTGCAATTCCAGATATTCATTCTTTTGACCTTACTGATAGAGAGCAATTCATCATTCTTGGCTGTGATGGACTGTGGGGGGTATTTGGGCCTAGTGATGCTGTTGATTTTGTTCAGAAATTACTAAATGAGGGTTTACCTGTCACGGCTGTGAGCCGCCATCTAGTAAGGGAAGCTGTTCGTGAGAGGCGCTGTAAAGATAATTGCACTGCACTTGTTATGGTATTCAAGCGCAACTA 1115 0.4744 MSGGSTQPGCGNGDSDVSPEGPNTYLNPKREADLETPDLTAKKLRTEAGSADNAAGCEEARNPLVVSDKVDKGNEADQQTRDSDNTRELAFEIEADAAEDKGSRHSMEDAWVVLLDASLDHPGKLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLSSGLPRELLDTKAAKRAILDGFRKTDDSLLQESAAGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSTLPDGSQNPSDVVHSLKAIVLTREHKAIYPQERARIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKVGVVAIPDIHSFDLTDREQFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVTAVSRHLVREAVRERRCKDNCTALVMVFKRN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00707 371 MobiDBLite consensus disorder prediction 1 88 - -
Bva03g00707 371 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 31 365 - -
Bva03g00707 371 CDD PP2Cc 98 368 IPR001932 -
Bva03g00707 371 Pfam Protein phosphatase 2C 98 356 IPR001932 -
Bva03g00707 371 Gene3D - 74 370 IPR036457 -
Bva03g00707 371 MobiDBLite consensus disorder prediction 64 88 - -
Bva03g00707 371 SUPERFAMILY PP2C-like 89 369 IPR036457 -
Bva03g00707 371 MobiDBLite consensus disorder prediction 1 22 - -
Bva03g00707 371 ProSiteProfiles PPM-type phosphatase domain profile. 94 368 IPR001932 -
Bva03g00707 371 PANTHER PROTEIN PHOSPHATASE 2C 31 365 IPR015655 GO:0004722|GO:0006470
Bva03g00707 371 SMART PP2C_4 84 366 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00707 Bva-Chr3 4233999 4240488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00707 75 320 PP2C-type Phosphatase Gene Family AT1G18030 73.984 6.27e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00707 K17500 - vvi:100257757 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00707 03 4233999 4240488 Bva03g00707 03 4233999 4240488 ECH