Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00688 ATGGTCTTCAACTCCTTTATATCTCCATGTCTTTGCTTCAGTGCAAGTAAAAATGATCTTTCAGTTCATAAGGATTCTGACATACCAAGCAGCCATAGCCAATCAGTGTCCGTGGATTCTGAGGTACCTAGCAGCCATGGCCAATCAGTGCTGGTTGATCCACCGGTACCAAGTAGCAGTGGAAACATAAGTAGAAACTTAAAGTATTCTGAATCTGAACTAAGAAAAGCAACCGACAATTTTCACTCTAGTAGAATACTTGGCAGAGGAGGCTTTGGGACTATGTACCATGGAATACTTAAAGATGGAAGTTCCGTTGCAATAAAGCGATTGCATGAAGACAAGTTCAAGAGCTTGAAGTTACCTGATGAGAAGCTCGAAAGTAAAAGACTTAGAAACTTCATGACTGAAGTTGCTGTGTTAGCATGCTTGTGCCATGAAAATCTTGTCAAACTGTATGGCTGCACCTCTCCACACACAGATGAACTACTAATAGTACAAGAATACGTTTCCAACAAAACTGTTTCTCATCATCTTCATGCGCTGATGAAACCAGGCACATTTTCCTGGCGTACACGACTAAATATTGCTGTACAAACTGCAAATGGATTAGCTTATCTCCATGCTTCTAATGTAATCCACCGTGATGTAAAAACCAACAATATTCTCCTCGACGACAGTTTCAATGCTAAAATTGCTGACTTTGGGTTGTCACGCATCGTCCCACTGGCACTTGGTGTTACCCATGTCACCACTGGTGCTGTTGGCACACTGGGCTACGTAGATCCACAGTATTATCAAAGTTGCCATCTTTCTGATAAAAGTGACGTATATAGCTTTGGTGTAGTATTAACAGAGCTAATAACTTCCCTGCCCGCCTATACTGAGGACGACGAAGAGCCTTTGCTTTCTGACTTAGCTGTCAATAAGATTTTATCCCGAGAACTCCACGAGATTGTTGATCCCACTCTTGGTTTTGAATCAGATGATTGGATAAATCAGACAATAAGTGCAGTGGCGGAGTTAGCATTCCAGTGCTTGCAACCTTACAGACACATGAGACCTTCTATGGCCGAGGTGTTGGATACTCTTGAGAGCATTAGAGGCGGAAGCACTAAAACTCCTCGTACCTGGGCTCCAAGAAATAACTCAAGTCTCACCAATGTTCATGTTGTTTCCCGCTTGCCTGATGATTATTTTGATAGGAAACATCAGAGAACAAATTG 1226 0.4217 MVFNSFISPCLCFSASKNDLSVHKDSDIPSSHSQSVSVDSEVPSSHGQSVLVDPPVPSSSGNISRNLKYSESELRKATDNFHSSRILGRGGFGTMYHGILKDGSSVAIKRLHEDKFKSLKLPDEKLESKRLRNFMTEVAVLACLCHENLVKLYGCTSPHTDELLIVQEYVSNKTVSHHLHALMKPGTFSWRTRLNIAVQTANGLAYLHASNVIHRDVKTNNILLDDSFNAKIADFGLSRIVPLALGVTHVTTGAVGTLGYVDPQYYQSCHLSDKSDVYSFGVVLTELITSLPAYTEDDEEPLLSDLAVNKILSRELHEIVDPTLGFESDDWINQTISAVAELAFQCLQPYRHMRPSMAEVLDTLESIRGGSTKTPRTWAPRNNSSLTNVHVVSRLPDDYFDRKHQRTN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00688 408 SUPERFAMILY Protein kinase-like (PK-like) 66 380 IPR011009 -
Bva03g00688 408 Gene3D Phosphorylase Kinase; domain 1 56 169 - -
Bva03g00688 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Bva03g00688 408 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 68 376 - -
Bva03g00688 408 Pfam Protein kinase domain 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00688 408 Gene3D Transferase(Phosphotransferase) domain 1 170 384 - -
Bva03g00688 408 ProSiteProfiles Protein kinase domain profile. 81 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00688 408 MobiDBLite consensus disorder prediction 27 64 - -
Bva03g00688 408 SMART serkin_6 81 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00688 408 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 68 376 IPR044652 -
Bva03g00688 408 MobiDBLite consensus disorder prediction 24 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00688 Bva-Chr3 4119648 4121546 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00688 69 375 Receptor kinase-like Gene Family AT1G25390 50.161 1.99e-97 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva03g00688 Pkinase 9.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00688 - - mtr:MTR_6g082700 449.129