Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00686 ATGGTCAAATTCTCCTTTATATCTCAATGTCTGTGCTTCTGTGGAAGTAAAAACGACCTTTCATTCCATAAGGATGCTGAGGTGAAGGGTACCCAGTTAGTGCCTCTGGATTCTGAGATACCAAGTGGCCACAAACAATCGGTGACTGTAGATTCTGAGGTACCTAGCAGCCATGGCCACAACCAATCGGTGCCTGTGAATTCTGAGGTACCTGGCAACCATGGCCACAACCAATCGATGCATGTGGATTCTGAGTTACCTAGCAGCCATGGCCAACCAGTGCTGGTTGGCACTCCGGCACTGAGTAGCCGCGACAACATAAGTAAAACCTTTATGTATTCTGAACTCGAAGAAGCCACCAACAATTTTGACTCTAGTAGAATACTGGGCAGTGGAGGCTATGGGACAGTGTACCATGGAATACTTGAGGATGGAAGTTCTGTTGCAATAAAGCACTTACATGAAGAGAGGTACAAGAATTTGAGATTACACGATGAGAAGCTCGAAAGTGAAAGACTTAAAAGGTTCACAAATGAAGTTGCCGTATTAGCTTGCTTGAGCCATGAAAATCTTGTCCAACTGTATGGTTGCACCTCACCGTACACAGATAAACTACTTCTAGTACAAGAATACGTTTCCAACAAAACCGTTTCTCATCATCTTCTTAGTGCGCTGAAGAAACCGGGCACATTTTCCTGGCCTACACGGCTAAATGTTGCTGTACAAACTGCAAGTGCATTGGCTTATCTCCATGCTTCTAATATAATCCATCGTGATGTGAAAACTagtaatattctttttgatgataattttaacGCTAAAGTTGCAGACTTTGGATTGTCACGCCTCTTCCCACTTGGTGTTACCCATATCACGACTGATCCTGCTGGAACACTGGGCTATACTGACCCAGAGTATTATCAAAGTTGCCATCTATCTGATAAAAGTGATGTATATAGCTTTGGGGTAGTGTTGATAGAGCTAATGTCTTCCCTGCCAGCTTTTAGTGAGGAGGTCAAAGAACCCTTTCTTTCTGATTTTGCcgtgaataagattttttttggagAACTGGTAAAGCTTGTTGATCCAGCTCTTGGTTTTGGATCAGATGATTGGATAAATCAGACAATAAGTGCAGTGGCGGAGTTAGCATTCCAATGCTTGCAACGTTACAGAGACATGAGACCTTCTATGGCCGAGGTGTTGGATACTCTAGAGAGCATTAGAGACGGAAGCACTAAAACTCCTCGTACCTGGGCTCCAAGAACTAACTCAAGTCTCACCAATGTTCATATTGTTTCCCGCTTGCCTGATGATTATTTTGATAGGAAACAACAGATAAGAAATTG 1349 0.4196 MVKFSFISQCLCFCGSKNDLSFHKDAEVKGTQLVPLDSEIPSGHKQSVTVDSEVPSSHGHNQSVPVNSEVPGNHGHNQSMHVDSELPSSHGQPVLVGTPALSSRDNISKTFMYSELEEATNNFDSSRILGSGGYGTVYHGILEDGSSVAIKHLHEERYKNLRLHDEKLESERLKRFTNEVAVLACLSHENLVQLYGCTSPYTDKLLLVQEYVSNKTVSHHLLSALKKPGTFSWPTRLNVAVQTASALAYLHASNIIHRDVKTSNILFDDNFNAKVADFGLSRLFPLGVTHITTDPAGTLGYTDPEYYQSCHLSDKSDVYSFGVVLIELMSSLPAFSEEVKEPFLSDFAVNKIFFGELVKLVDPALGFGSDDWINQTISAVAELAFQCLQRYRDMRPSMAEVLDTLESIRDGSTKTPRTWAPRTNSSLTNVHIVSRLPDDYFDRKQQIRN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00686 449 MobiDBLite consensus disorder prediction 42 86 - -
Bva03g00686 449 SUPERFAMILY Protein kinase-like (PK-like) 107 426 IPR011009 -
Bva03g00686 449 Gene3D Phosphorylase Kinase; domain 1 100 211 - -
Bva03g00686 449 MobiDBLite consensus disorder prediction 37 100 - -
Bva03g00686 449 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Bva03g00686 449 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 108 416 - -
Bva03g00686 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Bva03g00686 449 Pfam Protein kinase domain 125 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00686 449 SMART serkin_6 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00686 449 Gene3D Transferase(Phosphotransferase) domain 1 213 426 - -
Bva03g00686 449 ProSiteProfiles Protein kinase domain profile. 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00686 449 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 108 416 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00686 Bva-Chr3 4111095 4113757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00686 111 416 Receptor kinase-like Gene Family AT1G25390 51.133 3.25e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva03g00686 Pkinase 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00686 - - mtr:MTR_6g082700 492.656