Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00685 ATGATGTCCCTCCGAGCGTTTATGTCTATGTGTGCGTGCCGTAATGGAATTGGAGATGAGCTTTCAATACCTGTGGATTCTGAGATGCGGAGTAGCCATGGCTTCAGGAAGAAAATCTTCGAGTATATTGAACTTGAAGAAGCCACCAACAATTTCCACCCCAGTAGAAATCTGGGGAGTGGAAGCTATGGGACTGTATatcatgGAATACTACAAGATGGATGTCAGGTGGCAATAAAGCACTTAGACAAGAGCAGTTTCAAGAGCTTCAGATTAAATGATGagaaagtggaaagaaagttTATGAGAGGTTTCATAGACGAAGTGGCAGTCTTAACTCGCTTGAGGCATGGAAATCTTGTCCAAATTTATGGCAGTACCTCTCCTGACGACTATGAACTAGTCCTAGTACAAGAATACATTCCCAATGGAAGTGTTGCTGATCATCTTCGTGGCACATTGAAGAAACCGGGAACTCTCCCTTTGGTTACTAGATTGAATATTGCTGTCCAAACTGCAAGTGCATTGGCTTATCTCCATTCTTCTGGTGTAATACACTGTGATGTGAAAACCAGAAACATTCTGCTAGAGGATAGCTTCACCGCAAAAGTTACAGATTTTGGCTTGTCATGCCTTGGTGTTAAGCGTATTTCAGTCACTCCTGTTGGAACTCCTGGTTATATTGATCCAGAGTATTATGAACTGTTCAATCTTTCTGATAAGAGTGATGTCTACAGCTTTGGAGTGGTATTGATTGAGCTAATATCTTCCATGCCAGCTTTTAAAGACTATGACGAGAAACAGCCCCTTCTGGCTAAGTTCGCCATTAACAAGATCCTTCATGAACAACTTGATGACCTGGTTGACCCAGCACTTGGATTTAATTCAGATCAATGGGTACGTCAAACGGTAACTGCAGTGGCGGAGTTGGCATTCAGGTGTCTGTATCGCAAGAGGAAAATGAGGCCTTCCATGGCTGAGGTCTTGGACACTCTCAAGAGCATTAAAGCTGGAGCTCTTCAAGTGCTTCCAGGTAGTGACTATAGATTAGCTTTTCAAAGGTA 1064 0.4201 MMSLRAFMSMCACRNGIGDELSIPVDSEMRSSHGFRKKIFEYIELEEATNNFHPSRNLGSGSYGTVYHGILQDGCQVAIKHLDKSSFKSFRLNDEKVERKFMRGFIDEVAVLTRLRHGNLVQIYGSTSPDDYELVLVQEYIPNGSVADHLRGTLKKPGTLPLVTRLNIAVQTASALAYLHSSGVIHCDVKTRNILLEDSFTAKVTDFGLSCLGVKRISVTPVGTPGYIDPEYYELFNLSDKSDVYSFGVVLIELISSMPAFKDYDEKQPLLAKFAINKILHEQLDDLVDPALGFNSDQWVRQTVTAVAELAFRCLYRKRKMRPSMAEVLDTLKSIKAGALQVLPGSDYRLAFQR 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00685 354 Gene3D Phosphorylase Kinase; domain 1 23 140 - -
Bva03g00685 354 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 340 - -
Bva03g00685 354 SUPERFAMILY Protein kinase-like (PK-like) 36 335 IPR011009 -
Bva03g00685 354 ProSiteProfiles Protein kinase domain profile. 52 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00685 354 Pfam Protein kinase domain 53 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00685 354 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 340 IPR044652 -
Bva03g00685 354 SMART serkin_6 52 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00685 354 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Bva03g00685 354 Gene3D Transferase(Phosphotransferase) domain 1 141 342 - -
Bva03g00685 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Bva03g00685 354 PIRSF ILK 26 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00685 Bva-Chr3 4106292 4108938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00685 35 349 Receptor kinase-like Gene Family AT1G25390 48.750 2.10e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva03g00685 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00685 - - mtr:MTR_6g082700 360.533