Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00682 ATGGTTATTGTTGTATCTGTCAATCCAAAATTTGAGGCCTGCACACCTAGAAGTTGTGGAAATGGCCCCACCATCAAGTACCCTTTCTGGATTCCCCATGATCAAGATTATTTTTGCGGCTATCCTCATTTTGAAGTTAGCTGCAATAACAAGAACccaattctcaaaatttccaaCAATGAGTATTTAATCAAAAACATTTCTTACTCGAATTCTTCATTTCTTGCTGCTAACATAGCTGTCTATGAGGAAAACTGCCCTGCACCAATGTATAATTACAGCTTTGATCAGACTCCATTTACATATAGTTCAGAGAATGCCATTATCTCTTTCTTCTACAACTGCACCACGGAACCTGTAGATTACCCCACTTATGAAGTAGATTGTGCTAAAAACGTAAGCCATTATTCATTTGCTGTTTTTCATAAGGAGGCACTGGAGCACAAAAACTATACCTTGAATGAGTGTCAGTTCATGGTTAATGCGCCAGTGAGGATGAATGACGCTGTTAATTTCACTAGCTTATTGAGAATGAATTACACTGAGATTTTGAAGATgggttttgttttgaattggACTGCTCCCGATTGTGAGCGCTGTGAGAAAAGTGGCGGACGCTGTGGGTTTGATGATTATAAGTTCCTCTGCTTCTGCAGGGATAAGCCTCATAAGGAAAGTTGTGATGATGGTAATGCCTTAGGAAACGGTAATCATATTAGTGTGAGAAATAAAGTCATTGTAGGGGTTGGAGCTTCTGTTGTCACTGTGATTATAGGGTTGATTGCATTCTATATCTGTCGGCGCCGGAAGAAGCATAGTTAtgcaaaaacatatataaaatctgAGAGCATTTCTTCTATCTCCTCTGTAAGTTTAAAGGATCTTGAGAACGGCAGTAAATCTAAGTACTTTGGACTCCCTGTTTTCACCTATGATGAACTTGAAGAGGCCACTAACAACTTCGATTCTGAAAGAGAAATTGGAGATGGAGGCTTTGGAACAGTGTATTTTGGCAAACTTCGAGATGGGCGTTATGTTGCAGTGAAGAGGTTGTATGAGAGCAATTACAGGAGACTTGAGCAATTCAAAAATGAGGTTGAGATCCTAGCTGCCGTGCGCCATCAAAATCTTGTCTCACTCTATGGCTGCACCTCTCGCCACAGCCGCGAGCTCCTGCTTCTCACTGACAAAAGTGATGTGTTTAGCTTTGGAGTAGTATTAATTGAGCTAATATCATCCATGCCTGCTGTTGATATCACAAGGCATCGtcatgaaataaatttgtctAGCATGGCCATTAATAAGATTCAAAACCGGGCATTGCATGAACTTGTGGACCCAAACCTTGGGTTTGAATCAGATTCCAAGGTAAGGAAAGAGATCAATGCTGTAGCAGAGTTAGCTTTTCAATGCTTGCAGAGTATGAAAGATATGAGGCCGACTATGGAAGAAGTGCTGGAAAAACTGAAGGATATACATTTTGATGGCAAATATAAAAGCAAAGCAGAGGAGATGGACATCGCTGCAGATGATATTGTGTTGCTAAAGAATCAACCACCTCCAGCATCGCCGGATTCAAATATGAAGAGCTCATCTACAACACCAAATGATAGCAGATA 1619 0.3904 MVIVVSVNPKFEACTPRSCGNGPTIKYPFWIPHDQDYFCGYPHFEVSCNNKNPILKISNNEYLIKNISYSNSSFLAANIAVYEENCPAPMYNYSFDQTPFTYSSENAIISFFYNCTTEPVDYPTYEVDCAKNVSHYSFAVFHKEALEHKNYTLNECQFMVNAPVRMNDAVNFTSLLRMNYTEILKMGFVLNWTAPDCERCEKSGGRCGFDDYKFLCFCRDKPHKESCDDGNALGNGNHISVRNKVIVGVGASVVTVIIGLIAFYICRRRKKHSYAKTYIKSESISSISSVSLKDLENGSKSKYFGLPVFTYDELEEATNNFDSEREIGDGGFGTVYFGKLRDGRYVAVKRLYESNYRRLEQFKNEVEILAAVRHQNLVSLYGCTSRHSRELLLLTDKSDVFSFGVVLIELISSMPAVDITRHRHEINLSSMAINKIQNRALHELVDPNLGFESDSKVRKEINAVAELAFQCLQSMKDMRPTMEEVLEKLKDIHFDGKYKSKAEEMDIAADDIVLLKNQPPPASPDSNMKSSSTTPNDSR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00682 539 MobiDBLite consensus disorder prediction 512 539 - -
Bva03g00682 539 Gene3D Transferase(Phosphotransferase) domain 1 392 512 - -
Bva03g00682 539 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 6 393 - -
Bva03g00682 539 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 394 532 IPR044652 -
Bva03g00682 539 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Bva03g00682 539 Pfam Wall-associated receptor kinase galacturonan-binding 14 74 IPR025287 GO:0030247
Bva03g00682 539 MobiDBLite consensus disorder prediction 520 539 - -
Bva03g00682 539 Pfam Protein tyrosine and serine/threonine kinase 394 489 IPR001245 GO:0004672|GO:0006468
Bva03g00682 539 ProSiteProfiles Protein kinase domain profile. 321 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00682 539 Pfam Protein kinase domain 322 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00682 539 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 393 IPR044652 -
Bva03g00682 539 Pfam Wall-associated receptor kinase C-terminal 137 221 IPR032872 -
Bva03g00682 539 Gene3D Phosphorylase Kinase; domain 1 292 391 - -
Bva03g00682 539 CDD TM_EGFR-like 245 272 - -
Bva03g00682 539 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 394 532 - -
Bva03g00682 539 SUPERFAMILY Protein kinase-like (PK-like) 310 492 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00682 Bva-Chr3 4093408 4095930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00682 394 538 Receptor kinase-like Gene Family AT1G25390 53.750 3.20e-38 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva03g00682 PK_Tyr_Ser-Thr 5.9e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00682 - - mtr:MTR_6g083020 553.518