Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00673 ATGGCCGCCAAACGATTCTTTGACGATTCTGATCCTGACCCTGATAAGCCAAACGACAAACGCATGAGACCTAATTCTAGTAGACCTTCTTTTGCTTCAGTAATAGGAGAAGCGGTTATGGTGAAAAACTTGCAGAATCTCTTCTCAGGCTTGGAACCTTTGCTCAGAAAAGTGgTGAATGAAGAGTTAGAGCGTGCAATGCGACATTATTGTCCACTCTCTATAACTAGGTCTCCTTCTTTGCGAATACAAGCCATGGAGCAACCACCAAGCTTGCAGTTAGCATTCAGCAAGAAACTTTCTCTACCTATATTCACCGGCAGCAGGATACTAGCCGTTGATGGGAACCCTATCACCATCATTCTTGTTGACAAGAACAGTGATCAGATGGTTCCCACAAGTCTCCCTCACCCGATAAAGCTCCAAATCGTGGTTCTTGATGGAGATTTTCCGGCTGGGGATGATGAGCGATGGACTAGCGAGCAATTCAATAGAAACATAATAAAGGAGAGAACCGGCAAGCGACCGTTGCTTACCGGAGAGTTGAATATCACCTTGAGGGATGGAATTGCACCATTGGAGGACATTGGGTTTACTGATAACTCGAGTTGGATCAGAAGTAGGAAATTTAGGGTCGCGGTGAGGGTGGCTACAGGGAGCACTCAAGGTGTTCGAATTCGTGAAGGCATGACTGGTGCATTTATGGTTAAGGATCATCGTGGAGAATTGTACAAAAAGCACCATCCACCAATGCTACATGATGAAGTTTGGCGCTTAGAGAAGATTGCAAAAGATGGAGCTTTCCACAAGAAATTATCTGAAGAAGGGATTAAGACAGTGCAAGAATTTCTCAAGCTGTCCGTGGTTGACCCTAATAAGCTCagaaagGCTTTAGGGGTTGGGATGTCAGATAAAATGTGGGATGCGACAATGAAGCATGCAAAGACATGCGACATGGGAAACAAGTTGTATGTGCACCGTGGATCTAATTGCACTCTCCTTCTGAATCCTGTCTGCCAAGTGATTAGAGCTGAAATAAATGGCCAAATTGTTCCCACCAAAGAGCTGCAGAGCAATATGAATAggAGCTACGTACAGGGATTGGTGAGAGATGCATACATGAGATGGACTACCTTGGAGGAGGTTGATGCAGTTTTGAATGATAACATGACCCTGGCCTTATTAACACAAGGTGAAAGTATGGATCAGTATccaaacaacaacaataatcaaTCGTTGATGGTGGCATATGAGCAAAATGGTTACTATGTGGATAAATCACCCATAGAGATGACAGGATATGAACCTGGCTCTGGCTCCGGCTCCGGCTCTGGCTCCGGCAACGAGTGGCCGATGAATTCTACATATGCATCCACATCAGCGTTTGGGAATGACATTGCTTATAGCTTCTCAGAGTCACAATCTGATGGAGATATAAACCCTTCAAATAGGTGGAATTA 1460 0.4384 MAAKRFFDDSDPDPDKPNDKRMRPNSSRPSFASVIGEAVMVKNLQNLFSGLEPLLRKVVNEELERAMRHYCPLSITRSPSLRIQAMEQPPSLQLAFSKKLSLPIFTGSRILAVDGNPITIILVDKNSDQMVPTSLPHPIKLQIVVLDGDFPAGDDERWTSEQFNRNIIKERTGKRPLLTGELNITLRDGIAPLEDIGFTDNSSWIRSRKFRVAVRVATGSTQGVRIREGMTGAFMVKDHRGELYKKHHPPMLHDEVWRLEKIAKDGAFHKKLSEEGIKTVQEFLKLSVVDPNKLRKALGVGMSDKMWDATMKHAKTCDMGNKLYVHRGSNCTLLLNPVCQVIRAEINGQIVPTKELQSNMNRSYVQGLVRDAYMRWTTLEEVDAVLNDNMTLALLTQGESMDQYPNNNNNQSLMVAYEQNGYYVDKSPIEMTGYEPGSGSGSGSGSGNEWPMNSTYASTSAFGNDIAYSFSESQSDGDINPSNRWN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00673 486 Pfam Calmodulin binding protein C-terminal domain 322 382 IPR046829 -
Bva03g00673 486 MobiDBLite consensus disorder prediction 433 454 - -
Bva03g00673 486 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Bva03g00673 486 PANTHER OS02G0177800 PROTEIN 1 483 IPR012416 GO:0005516
Bva03g00673 486 MobiDBLite consensus disorder prediction 437 454 - -
Bva03g00673 486 MobiDBLite consensus disorder prediction 1 23 - -
Bva03g00673 486 PANTHER PROTEIN, PUTATIVE-RELATED 1 483 - -
Bva03g00673 486 MobiDBLite consensus disorder prediction 1 29 - -
Bva03g00673 486 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00673 Bva-Chr3 4040634 4044416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00673 3 384 Calmodulin-binding Proteins AT5G57580 48.579 1.02e-120 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00673 - - gmx:100802257 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00673 03 4040634 4044416 Bva03g00673 03 4040634 4044416 BWGD
Bva03g00673 03 4040634 4044416 Bva03g00673 03 4040634 4044416 ECH