Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00662 ATGTACTCATCAAGGAAGAAAATCCACAAAGATAAAGATGCTGAGCCAACCGAGTTTGAAGAGTCAGTTGGACAGGCACTGTTTGATTTGGAAAATACCAACCAGGAGctgaaaagtgatttaaaaGATCTATACATCAATTCTGCAGTTCAAATCGATGTTTCTGGCAATCGCAAGGCTGTGGTTATTCACGTTCCTTTTAGATTAAGGAAAGCTTTCCGGAAGATTCATGTCAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGGAAGGATGTTATCCTGATTGCCACCCGGAGAATATTGAGGCCACCAAAGAAGGGTTCTGCTGTTCAGCGTCCCCGCACTCGTACCCTCACTGCTGTGCATGAGGCAATCCTGGAGGACGTTGTATTACCTGCTGAGATTGTTGGGAAGCGTGTTAGGTATAGAGTTGATGGGTCCAAGATCATGAAGGTTTTCTTGGACCCGAAGGAGCGAAACAACACCGAATACAAGCTGGAGACTTTTTCTGCAGTATACAGGAAGCTGTCGGGCAAAGATGTTGTGTTTGAGTATCCCATCGCAGAGGCTTA 575 0.4435 MYSSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPFRLRKAFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRTRTLTAVHEAILEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPIAEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00662 191 Coils Coil 27 47 - -
Bva03g00662 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Bva03g00662 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Bva03g00662 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Bva03g00662 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00662 Bva-Chr3 3966006 3968620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00662 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 81.675 5.02e-116 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00662 K02993 - gmx:100499757 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00821 04 5425173 5428008 Bva03g00662 03 3966006 3968620 ECH
Bva03g00662 03 3966006 3968620 Bva03g00662 03 3966006 3968620 ECH