Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00646 ATGCGCTTAAGCTGTAACGGTTGTCGGGTCCTCCGCAAAGGTTGTACCGCCGATTGCCCTATCCGACCGTGCCTTCAATGGATCAAATCCTCAGAATCCCAAGCCAACGCCACCGTCTTCCTCGCCAAGTTTTACGGCCGCGCCGGCCTCCTCAACCTCGTCAGTGCTGGACCCCCACACCTCCGACCAGCGATTTTTAAGTCCTTGCTCTACGAAGCTTGCGGGCGAATTGTTAACCCGATTTTCGGGTCAGCAGGGTTGCTTACGTCCGGGAGCTGGCACCTCTGTCAAGCTGCCGTGGAAGCCGTTCTGAGAGGCGTGCCGATCAAGCAAGTTTCCTCCGATTCGGCTTTGGATGGCGTGAGCCCACTGCTCAAGGCCTGCGATATTCGCCACGTGGCCAAGAAAGGAAACTCTTGCGCCGTTGATCAGCTCCACAAGGTGAAGTCTCGGAGCAAGTTCAAGCGCAAAGGTGAAAAGCCGAAGTCCCATGTACAAGTAGAGTCGGTAGCGGAGCTAACGGTGCAGTCGGAGAACGAGTTGGATGGGTCGGTGAGTCATGACTCGGGGTTGAGTGAACATTGGAGTCAAGGTGGGAGTGTAAACGGGGAAGCTGATAGCAGTTCAGTTGAGACGGTGGAAGCTTTATTGGGCAATGGTGACCGGAGAAACGAAGATGGCAGTTTAGACTTAGAATTGACTTTGGGATGGGTCCACTG 719 0.5494 MRLSCNGCRVLRKGCTADCPIRPCLQWIKSSESQANATVFLAKFYGRAGLLNLVSAGPPHLRPAIFKSLLYEACGRIVNPIFGSAGLLTSGSWHLCQAAVEAVLRGVPIKQVSSDSALDGVSPLLKACDIRHVAKKGNSCAVDQLHKVKSRSKFKRKGEKPKSHVQVESVAELTVQSENELDGSVSHDSGLSEHWSQGGSVNGEADSSSVETVEALLGNGDRRNEDGSLDLELTLGWVH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00646 239 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bva03g00646 239 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Bva03g00646 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 237 - -
Bva03g00646 239 MobiDBLite consensus disorder prediction 177 211 - -
Bva03g00646 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00646 Bva-Chr3 3883819 3884949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00646 1 235 AS2 family AT3G02550 51.695 5.92e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva03g00646 LOB 3.4e-22 No_clan