Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00642 ATGGAGGAAAATTTGCCTCCCGGCTTCAGATTCCATCCTACAGATGAAGAGCTCATCACGTTTTATCTGACAAGGAAAGTTTCTGATAGAAGTTTCACATCCAAGGCTGTAGCTGTTGTTGATCTCAACAAGTCTGAACCTTGGGACCTCCCAGgTAAGGCATCCATGGGAGAGAAGGAGTGGTATTTCTTCAGCTTAAGAGATCGGAAGTATCCAACTGGGCTTCGAACAAACCGTGCCACAGAATCAGGGTATTGGAAAACCACAGGGAAAGACAAGGAAATTTTCCGTGCTGGTGTTTTGGTGGGAATGAAGAAAACCCTAGTTTTTTATAAGGGAAGAGCTCCAAGGGGTGAGAAAAGCAATTGGGTCATGCATGAATACAGGCTGGAAAACAAGGACCCCTTTAGACCTTCAAAGGAAGAATGGGTGATTTGCAGGGTATTCCAGAAGAGAGCAGCAGCCAAAAAGCCACAGCCAACATCATCCTCCCAACCTTCAATGGGCTCCCCCTGTGATACAAATTCAATCGTCAATGAATTTGGTGATATCGAGCTGCCAAACTTAAATACCATTGCAAATTCATCAAGTGTATTCACTAGCAATATTTCAGCTCAAACTTACCTTAGCGATAGCAACAATGTTAACACAAATATGAACTTAAACATGAATTGGCCATCATGTACTACTAGTGAGGTTCCAATATCCCTTCCATGGCATTCAGCTGGCTTGTTGAGTCCAAATCTTTCACTGAATTCCTTGCTCCTCAAGGCATTACAGCTTAGGAGTAGTTATCAACAAAGAGAAGCAGCAGCTATGGAACATTTTCCTCCATACATGACACAAGGACTTTCTTCCCAACTTGGAGCTGATCTGAGTTCAAGCCTAACTGCTTCttcctcaaaatttttagaatgtaTGCCacagcaacagcaacagcaacagcagcagcaagaACAACCATTCAATTTGGACTCCATTTGGTG 986 0.4077 MEENLPPGFRFHPTDEELITFYLTRKVSDRSFTSKAVAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKDPFRPSKEEWVICRVFQKRAAAKKPQPTSSSQPSMGSPCDTNSIVNEFGDIELPNLNTIANSSSVFTSNISAQTYLSDSNNVNTNMNLNMNWPSCTTSEVPISLPWHSAGLLSPNLSLNSLLLKALQLRSSYQQREAAAMEHFPPYMTQGLSSQLGADLSSSLTASSSKFLECMPQQQQQQQQQQEQPFNLDSIW 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00642 328 MobiDBLite consensus disorder prediction 308 328 - -
Bva03g00642 328 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Bva03g00642 328 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Bva03g00642 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 268 - -
Bva03g00642 328 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Bva03g00642 328 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Bva03g00642 328 PANTHER BNACNNG63190D PROTEIN 2 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00642 Bva-Chr3 3868250 3869999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00642 1 328 NAC Transcription Factor Family AT3G18400 60.767 2.53e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g00642 NAM 4.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00642 - - pvu:PHAVU_004G156700g 444.121