Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00636 ATGGCTCAATTCACAGCAGATTTGCAAAGCTTTAGACCCTCATTTCCTTTCCCTGACATTGATCCAAACATGGAATTTATAAATCAACTAACCGGGATGAATTCAAACCTGAATTGGCCGAGCTTGATCCCTTTCACCAGTGATAGTTTCTTGGGTCCTCCAGAACCTGAATTTCCAGaaaatgaaatccATGAAAGTAAAAAGAGGAAAGCAATGGATTTTCCAGAGACCAGTTCTGCAAACTCAACTCCACAAGTTTCTGAATCAGGAAGCAAGATCAAAAGTaCTGGAAGAGGTAAGAGAGCAAAGGGCAATGttacagaagaagagaaaccAAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACTGACAGTCACAGTTTGGCAGAAAGgGTTAGAAGAGggaaaatcaatgaaaaactAAAGTGCTTGCAGAACATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAGTAATGTTAGATGAGATCATAAACTATGTCCAGTCCTTGCAGCATCAAGTAGAGTTCCTCTCTATGAAGCTTACTGCAGCAAGTTCCTATTATGACTTCAATGCAGAGACAGATAATTTAGAAACAATGCAGATGAGAGCATCCGAGACAAAAGAATTGGGGAAATCTGTGAGAGAAGTAGCTGTTACCAACCAAGTTGTCCCCTTTCACTACAGTTTTGGATATGTTCAATCTCATAAACCATACAAGACATG 737 0.3853 MAQFTADLQSFRPSFPFPDIDPNMEFINQLTGMNSNLNWPSLIPFTSDSFLGPPEPEFPENEIHESKKRKAMDFPETSSANSTPQVSESGSKIKSTGRGKRAKGNVTEEEKPKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASSYYDFNAETDNLETMQMRASETKELGKSVREVAVTNQVVPFHYSFGYVQSHKPYKT 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00636 245 MobiDBLite consensus disorder prediction 50 130 - -
Bva03g00636 245 MobiDBLite consensus disorder prediction 58 74 - -
Bva03g00636 245 Gene3D - 121 193 IPR036638 GO:0046983
Bva03g00636 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 174 IPR011598 GO:0046983
Bva03g00636 245 MobiDBLite consensus disorder prediction 75 93 - -
Bva03g00636 245 SMART finulus 130 180 IPR011598 GO:0046983
Bva03g00636 245 CDD bHLH_AtBPE_like 114 199 - -
Bva03g00636 245 MobiDBLite consensus disorder prediction 101 130 - -
Bva03g00636 245 PANTHER TRANSCRIPTION FACTOR BEE 1 60 225 - -
Bva03g00636 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 192 IPR036638 GO:0046983
Bva03g00636 245 Pfam Helix-loop-helix DNA-binding domain 128 175 IPR011598 GO:0046983
Bva03g00636 245 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 225 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00636 Bva-Chr3 3833466 3835167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00636 65 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 66.463 1.38e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva03g00636 HLH 5.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00636 - - gmx:100806942 317.39