Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00635 atgtcttcttcttcaaagAGCACGAGTAGCTCTAGTGAAGATGATAATGAGCTCAGGAGAGGACCTTGGACTCTTGAAGAGGATACTATGCTCACTCAATACATTGCTAAACACGGAGAAGGGAGTTGGAATTTGCTGGCAAAACGTTCAGGGCTGAGAAGAACAGGAAAGAGTTGCAGACTGAGATGGTTAAACTATCTAAAACCAGATGTAAAGCGTGGAAATTTAACCCCTCAAGAGCAACTTCTGATTCTTGAACTCCACTCCAAGTGGGGCAACAGATGGTCAAAGATAGCACAGCATTTGCCGGGGAGGACAGACAATGAGATCAAGAATTATTGGAGAACACGGGTGCAGAAAAAAGCAAGACATCTTAAAATCGACGCAGACAGCAGAGAGTTTAAGCAACTGCTTGGGCGGTTCTGGGTGCCAAGATTGTTGCAGAAAGCAAGAGATTCATGGTCTTCTTCAGCCATGTCAGTTGAAAACCAACCAGCTCCTCTGCTTCTAGACACTGTTTCCGGTCAGTATTCAGCAGCAGGGACAACCCCACCACAGATTCCAATCCTCAGTTTTTCAGATCAGCATCAGCACAACTTAGAATTAGACCATAACATGTGTTCTTCAGAATCAGCGAATGCTCCAATTCTGCCTCAGTTCTTGGGATCCACTGCCACGCCATTTCCTGCCCAGACAACACTGACACGAGCACATATGTGTATGATGGCTACTCTGTCAATCCCGACATGGAATCCTTCAACCTCGAAGCTGCAATG 776 0.4497 MSSSSKSTSSSSEDDNELRRGPWTLEEDTMLTQYIAKHGEGSWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKKARHLKIDADSREFKQLLGRFWVPRLLQKARDSWSSSAMSVENQPAPLLLDTVSGQYSAAGTTPPQIPILSFSDQHQHNLELDHNMCSSESANAPILPQFLGSTATPFPAQTTLTRAHMCMMATLSIPTWNPSTSKLQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00635 258 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Bva03g00635 258 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Bva03g00635 258 Gene3D - 76 121 - -
Bva03g00635 258 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Bva03g00635 258 CDD SANT 77 116 IPR001005 -
Bva03g00635 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Bva03g00635 258 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 233 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bva03g00635 258 SMART sant 19 69 IPR001005 -
Bva03g00635 258 SMART sant 72 120 IPR001005 -
Bva03g00635 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Bva03g00635 258 CDD SANT 22 67 IPR001005 -
Bva03g00635 258 MobiDBLite consensus disorder prediction 1 22 - -
Bva03g00635 258 Gene3D - 20 72 - -
Bva03g00635 258 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Bva03g00635 258 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Bva03g00635 258 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 3 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00635 Bva-Chr3 3827509 3828720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00635 15 149 MYB Transcription Factor Family AT1G68320 77.037 7.78e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g00635 Myb_DNA-binding 7.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00635 K09422 - gmx:778042 321.627