Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00629 ATGTATGGTGGAGACGAAGTATCTGCAATAGTGGTTGACTTGGGCTCTCACACATGTAAAGCTGGTTACGCTGGTGAAGATGCTCCCAAAGCTGTGTTTCCCTCAGTTGTTGGAGCAATTGATCATATGGACATTGATGAACCTGATAATACAGAAAAGAACTCTGAATCTGAGAAAACCAACGGAAAACGCAAACTGTATGTAGGATCTCAGTCCTTAGGATACCGCAGAGACCATATGGAGGTTCTGTCACCGTTAAAGGATGGAGTTGTTGTTGATTGGGATATTGTTGACAACATATGGGATCATGCCTTCAGGGAATGCTTATTGATTGATCCTAAAGAGCATCCAATGTTGCTTGCTGAACCTTCTTCTAGCACACAACAACAGAGAGAAAGGACTGCAGAGcttatttttgaaaagtaCAAAGTACCTGCATTGTTTTTGGCCAAGAATGCTGTTCTGACATCTTTTGCATCAGGGCGTGCTACCTCATTAGTTGTTGATTGTGGTGGAGGATCAACTACAATTGCACCAGTACATGATGGTTATGTTCTTCAAAAGGCAGTGGCAACTTCACGAATTGGAGGAGAATTTCTCACAGATTGCTTGATGAAAAGTTTGGAAAGCAAAGGTATCATGATAAAACCCCGATATTCCTtcaagagaaaggaaatacGACCTGGAGAGTTTCAGACTGTAGACGTTGATTTTCCAAATACAACTGAAAGCTACAAGCTCTACTCCCAGAGGGTGATTGCTAGTGATATCAAGGAATGTGTGTGCCGCGCTCCAGATACTCCTTATGATGAGACTGGATATTCAAATATTCCAATGACTGCATATGAGCTTCCTGATGGCCAGACTATTGAAATTGGAGCTGATAAATTCAAGATTCcagatattctttttaatccATCCCTTGCACAGACGATCCCTGGCATGGAGAGTTTTGTAGAAATTGCTTCTTCAGTTCGTGGTCTGCCTCatatggTTATAGAGAGTATTAATAAGTGTGATGTGGACATTCGAAGAGAATTATTTAGTAGCATATTGCTTGCTGGTGGCACAGCTTCAATGCAGCAATTGAAGGAACGGCTCGAGAAAGACTTGCTAGAGGATACCCCTCAAGCTGCTAGAATAAAAGTATTGGCCAGTGGAAATGCAACCGAAAGAAGGTTCAGTGTTTGGATCGGGGGAAGCATATTGGCTTCTCTTGGCTCCTTCCAGCAAATGTGGTTCTCCAAGTCCGAGTATGAAGAGCATGGAGCTTCGTATATCCAAAGAAAGTGTCCTTG 1298 0.4106 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDHMDIDEPDNTEKNSESEKTNGKRKLYVGSQSLGYRRDHMEVLSPLKDGVVVDWDIVDNIWDHAFRECLLIDPKEHPMLLAEPSSSTQQQRERTAELIFEKYKVPALFLAKNAVLTSFASGRATSLVVDCGGGSTTIAPVHDGYVLQKAVATSRIGGEFLTDCLMKSLESKGIMIKPRYSFKRKEIRPGEFQTVDVDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDETGYSNIPMTAYELPDGQTIEIGADKFKIPDILFNPSLAQTIPGMESFVEIASSVRGLPHMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEDTPQAARIKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00629 432 SUPERFAMILY Actin-like ATPase domain 161 431 IPR043129 -
Bva03g00629 432 SMART actin_3 7 432 IPR004000 -
Bva03g00629 432 MobiDBLite consensus disorder prediction 44 63 - -
Bva03g00629 432 Pfam Actin 4 431 IPR004000 -
Bva03g00629 432 SUPERFAMILY Actin-like ATPase domain 5 168 IPR043129 -
Bva03g00629 432 PANTHER - 2 431 - -
Bva03g00629 432 Gene3D - 381 432 - -
Bva03g00629 432 PRINTS Actin signature 155 174 IPR004000 -
Bva03g00629 432 PRINTS Actin signature 130 143 IPR004000 -
Bva03g00629 432 PRINTS Actin signature 28 37 IPR004000 -
Bva03g00629 432 CDD NBD_sugar-kinase_HSP70_actin 10 196 - -
Bva03g00629 432 Gene3D Actin; Chain A, domain 4 197 310 - -
Bva03g00629 432 PANTHER ACTIN 2 431 IPR004000 -
Bva03g00629 432 Gene3D - 167 371 - -
Bva03g00629 432 Gene3D - 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00629 Bva-Chr3 3727635 3737823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00629 1 431 Cytoskeleton Gene Families AT5G09810 38.018 2.01e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00629 K11340 - gmx:100785066 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00629 03 3727635 3737823 Bva03g00629 03 3727635 3737823 ECH