Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00621 ATGGATCTAGAGGAAAAATTCCTTGCTAAAGTTTCTGGCGTTCAAAGCCTATCTTCTAGCGTGCAAAGCACTCCAGAGAAGAATGGTCACTCAGATGACGCTTCAAGAAGTCCAGAACTCCTTCAAGAATTCTTGAAATCTGGTCCAAAGAAGGAACTTCTTCGAACATGCTTTGATAAGGACAAAAAGAACATTTCATCAAAAAGCAGGATGACTGATACTAAGTCAACCAGTAAGATAAACAAGAAACAGGACTCTAAAAAGGCTTCGAGTCTCAGCAATCAGTCCTTTGGGAAGCAACAAAGAAAGGGTGAGAACCCCACAAGACTCATGCCAGCTCCTGACATGTCTTCTGATTTTGGAAATTCAAACACCTGGATCTGTAAAAATTCTGCTTGTAGAGCTGTTCTATCAATTGATGACACGTTTTGTAGAAGGTGCTCTTGCTGTATTTGTCATCTTTTTGATGATAACAAAGATCCCAGTCTTTGGCTGGTATGCACATTTGAATCTGGTCAAGGAGACTCATGTGGTCTATCTTGTCACATTGAGTGTGCTCTTCAGCATGAAAAAGTTGGAGTTGTTGATCATGGGCAGCTGATGCAGCTAGATGGTAGTTACTGTTGTGCATCTTGTGGTAAAGTTTCGGGAATACTTGGaTGTTGGAAGAAACAATTAAGTATAGCAAAAGATGCTCGACGTGTGGATATACTCTGTTATAGAATATATTTGAGCTACAGGCTTTTGGATGGGACTTCTAGGTTTAAAGGACTGCATGAAATTGTAGAAGATGCAAAGGCAAAACTGGAAACAGAAGTTGGTCCTGTGAGTGGAGTTTCTTCTAAGATGGCACGGGGCATTGTTAGCAGACTCTCTATAGCTGGTGATGTGCAGAAACTCTGCTCTCTTGCAATTGAGAAAGCTGATGAATGGTTGGCCAGTATTTCCAATGTGGATCCAGATTCTGGAGAGGGTTCACTTCCTGCTGCCTGCAAGTTTTTTTTCGAAGAAGTTTCGTCTTCATCAGTCACAATCATATTGATTGAAATGCCAAATGCGTCTTCTGAGGACATTAAAGGATACAAGCTCTGGTATTACAAGAGTAGGGAGGAATCACACACAAAAGATCCTGTTTGCGTGTTTCCCAGATCTCAGAGGAGGATATTGATATCCAATCTCCAGCCTTGCACAGAATATATTTTTCGGATTATATCTTATACAGATAGTGGTGACCTTGGTCATTCTGAAGCCAAGTGTTTCACCAAGAGTATTGagataataaacaaaaatcccTCTTCAGTAGTTACTTTGAATCTTAAGAAAGAGAACCATCAAACTGGAGGCAATTCTTCTGGCTCTAAACCAGAGGATAACCCTGGAATAGGAGATTCTGGATTTAAGGTTCGAGACCTTGGAAAAATCTTGCGTCTTGCTTGGGCTCAAGAACAAGTTTGCCTTGAGGGGTTTTGCCGTGCTGATGTGAAAAATTGCTGTGGAGGAAGCAAAATGGTCAAACCTGAAACTCAAGAAGAAGAACGGTTGCCTGCAGCTTCACGAGGTCTTGATTTAAATGTCGTGTCGGTGCCTGATCTGAATGAAGAACTGACCCCTCCTTTTGAGTCTTCAAGGGATGAAGATAATGGTTGCACCTTGCAGCAGGCTGTTGAGGCAGATGATGATGCTGCTTCCCATGATGCagagaaaaatgttttatcaaGATCACACGGCAGCGGCGACTCCCAAACCTGGACACATGGACCAACTGGAGAAGTCCTGGCCGTTGATTCCTGTGGAGGCGTAAATAGGAAAAGGGCAACAAGCACGAACGAAGAGATGCATGATTGCGACAGCACTTTGATAAATAGTTCGCCATTACACGTATCTGATGGTATATGTTCCTTGGACGAGAACTTTGAGTATTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAAGGTCACATTAAACAAGAATTTAGGTTGAAATTGCTAACATGGTTTAGTTTGAGGGCAACGGAGCAAGAACGTAGGGTGGTTAATACCTTTATTCAAACTCTGATCGATGATCCAAGTAGTTTGGCAGGACAACTGATCGATTCCTTTTCTGATATTATATCCAGCAAGAAACCAAGGAATGGATTCTGTAGTAAGCTGTGGCATTA 2159 0.4141 MDLEEKFLAKVSGVQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFDKDKKNISSKSRMTDTKSTSKINKKQDSKKASSLSNQSFGKQQRKGENPTRLMPAPDMSSDFGNSNTWICKNSACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTFESGQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGSYCCASCGKVSGILGCWKKQLSIAKDARRVDILCYRIYLSYRLLDGTSRFKGLHEIVEDAKAKLETEVGPVSGVSSKMARGIVSRLSIAGDVQKLCSLAIEKADEWLASISNVDPDSGEGSLPAACKFFFEEVSSSSVTIILIEMPNASSEDIKGYKLWYYKSREESHTKDPVCVFPRSQRRILISNLQPCTEYIFRIISYTDSGDLGHSEAKCFTKSIEIINKNPSSVVTLNLKKENHQTGGNSSGSKPEDNPGIGDSGFKVRDLGKILRLAWAQEQVCLEGFCRADVKNCCGGSKMVKPETQEEERLPAASRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDAEKNVLSRSHGSGDSQTWTHGPTGEVLAVDSCGGVNRKRATSTNEEMHDCDSTLINSSPLHVSDGICSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRATEQERRVVNTFIQTLIDDPSSLAGQLIDSFSDIISSKKPRNGFCSKLWH 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00621 719 MobiDBLite consensus disorder prediction 442 463 - -
Bva03g00621 719 MobiDBLite consensus disorder prediction 12 28 - -
Bva03g00621 719 ProSiteProfiles Fibronectin type-III domain profile. 327 426 IPR003961 GO:0005515
Bva03g00621 719 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Bva03g00621 719 SUPERFAMILY Fibronectin type III 335 416 IPR036116 GO:0005515
Bva03g00621 719 MobiDBLite consensus disorder prediction 11 41 - -
Bva03g00621 719 PANTHER VIN3-LIKE PROTEIN 1 55 719 - -
Bva03g00621 719 PANTHER VIN3-LIKE PROTEIN 2-RELATED 55 719 IPR044514 GO:0010048|GO:0040029
Bva03g00621 719 MobiDBLite consensus disorder prediction 87 103 - -
Bva03g00621 719 MobiDBLite consensus disorder prediction 573 587 - -
Bva03g00621 719 Pfam Fibronectin type III domain 334 413 IPR003961 GO:0005515
Bva03g00621 719 MobiDBLite consensus disorder prediction 557 588 - -
Bva03g00621 719 CDD FN3 335 411 IPR003961 GO:0005515
Bva03g00621 719 MobiDBLite consensus disorder prediction 442 457 - -
Bva03g00621 719 MobiDBLite consensus disorder prediction 558 572 - -
Bva03g00621 719 MobiDBLite consensus disorder prediction 64 86 - -
Bva03g00621 719 Gene3D Immunoglobulins 328 424 IPR013783 -
Bva03g00621 719 MobiDBLite consensus disorder prediction 64 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00621 Bva-Chr3 3677930 3683116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00621 124 712 PHD Gene Family AT3G24440 49.917 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00621 - - gmx:100780157 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00621 03 3677930 3683116 Bva03g00621 03 3677930 3683116 BWGD
Bva03g00621 03 3677930 3683116 Bva03g00621 03 3677930 3683116 ECH