Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00613 ATGACGACTCTTTCCAATGGTCATGCTCCTGCGAAGATCCCCACAGTCAAGTTCACCAAGCTCTTCATCAATGGACACTTCGTTGATTCACTTTcagGGAAAACCTTCGAAACCATAGACCCAAGAACAGGGGATGTAATCGCAAGAATCGCGGAGGCTACCAAGGAAGATGTTGATCTTGCCGTGAAGGCTGCACGTGACGCATTTGACAATGGCCCGTGGCCGCGCATGCCCGGCGTGGCAAGAGCAAAGATTATGTTGAAATTGGCAGACCTAATTGAAGAAAACATAGAAGAACTAGCAGCATTGGACGCCATTGATGCTGGTAAGCTATACAGTTGGTGTAAGAACGTGGACATCCCTCAAGTGGCTGCTACTCTACGTTACTACGCCGGTGCTGCTGATAAGATTCACGGAGAGACACTAAAAATGGCTCAGGAGCTCCAAGGGTACACACTCATGGAACCTATTGGTGTTGTCGGACACATTATCCCTTGGAATTTTCCTAGTACCATGTTCTTCGCCAAGGTTAGCCCGGCCTTAGCTGCCGGCTGCACCATGATCCTCAAGCCTGCCGAGCAAACACCTCTGTCAGCTCTGTTTTATGCTCACCTTGCTAAGCTGGCTGGTATTCCAGATGGAGTGCTTAATGTAGTACCAGGTTTTGGCCCAACTGCCGGTGCTGCAATTAGCTCACACATGGACATTGATGCGGTCAGTTTCACTGGTTCTACTGAAGTAGGGCGTGAAGTAATGCAGGCCGCAGCTAGGAGTAACTTGAAGCCAGTTTCACTTGAGTTAGGAGGCAAGTCACCCATGATCATTTTTGATGATGCTGACGCAGATAAGGCTGCTGAGCTTGCACTTCTTGGCATCGTATTTAACAAGGGAGAAATCTGTGTGGCGGGTTCCCGCGTGTTTGTTCAGGAAGGGATTTATGATGAATTTGAGAAGAAATTGGTCGAGAAGGCCAAAGCCTGGGTAGTTGGAGACCCCTTTGATCCTAAAACTCAACAAGGTCCCCAGTGTGACAAGAagcaatttgataaaattctcTCTTATATTGAGCATGGGAAGAAGCAAGGAGCCATCTTGTTGACCGGCGGCAAACCCATCGGTGACAAGGGATACTACATCGAGCCAACAATTTTCGCAAACGTTAAGGAGGAGATGCTGATAGCAACGGATGAAATATTTGGACCTGTGATGGCACTCTCCAAGTTCAAGACAATTGAGGAAGCAATCAAGAAAGCCAACAACACCAGATATGGGCTCGCAGCTGGGATTGTAACTAAGAACATAGACACGGCAAACACTGTGTCAAGGTCTATTCGCGCAGGCATCATTTGGATCAACTGCTATTTTGCCTTCGGCAATGACACTCCTTATGGAGGATATAAGATGAGCGGATTTGGAAGAGATTTTGGGTTGGATGCCCTCCACAAgaGCACTCCCTCGCTCGCTCCCTCTGCAATTTGCTTTCTCTCTACAACCTTCCTTCTTGGATTGGTCCCAGCAGCGGAGACACAGACACCATCAGGGATAGAGATGGCTACTCTTTCCCATGCGAAGATCCCCACCATCAAGTTCACCAAGCTCTTCATCAATGGCCACTTCGTTGATTCAGTTTCAGGGAAAACTTTCGAAACTATAGACCCAAGAACCGGAGAGGTGATTGCAAGAATCGCAGAGGCCACTAAAGAAGACATTGATCTTGCCGTGAAGGCTGCACGTGAAGCATTTGACAATGGTCCGTGGCCCCGCATGCCCGGCGTGGCAAGAGCAAGGATTATGTTGAAATATGCAGACCTAATTGAAGAAAACATAGAAGAACTAGCAGCATTGGATACCATCGATGCTGGTAAGCTATACAGTGGGTGTAAGGCCGGGGAAATCCCTCAAGTTGCTGCTACTCTACGTTACTATGCGGGTGCTGCCGATAAAATCCATGGAGAGACATTAAAAATGTCTCGAGAGCTCCAAGGGTACACACTCATGGAACCTATTGGTGTTGTCGGACACATTATCCCTTGGAATTTTCCTAGTAGCTTGTTCTTCGCCAAGGTTAGCCCGGCCTTAGCTGTCGGCTGCACCATGATCCTCAAGCCTGCCGAGCAAACACCTCTGTCAGCTCTGTTTTATGCTCACCTTGCTAAGCTGGCTGGTATCCCAGATGGAGTGCTTAATGTAGTACCAGGTTTTGGCCCAACTGCCGGTGCTGCAATTAGCTCACACATGGACATTGATGCGGTCAGTTTCACTGGTTCTACTGAAGTAGGCCGTGAGGTAATGCAGGCCGCAGCTAAGAGTAACTTGAAGCCAGTTTCACTTGAGTTAGGAGGCAAGTCACCCATGATCATTTTTGATGATGCTGATGTAGATACGGCTGCTGAGCTTGCACTTCGTGGCATCGTATATAACAAGGGAGAAATCTGTGTGGCAGGTTCCCGCGTGTTTGTTCAAGAAGGGATTTATGATGAATTTGAGAAGAAATTAGTAGAGAAGGCAAAAGCATGGGTAGTCGGAGACCCTTTTGATCCTGAAGTTCAACAAGGTCCCCAGTGTGACAAGAAGCAATTTGATAAGATTCTTTCTTACATTGAGCATGGAAAGAGACAAGGAGCCACCTTGTTGACCGGCGGCAAACCCATCGGTGACAAGGGATACTACATCGAGCCAACAATTTTCGCATACGTTAAGGAGGACATGCTGATAGCAAGGGATGAAATATTTGGGCCTGTGATGGCACTCTCCAAGTTCAAGACCATTGAGGAAGCAATCAAGAAAGCCAACAACACCACCTATGGGCTTGCAGCTGGGATTGTAACGAAGAACATAGACACAGCAAACACTGTGTCAAGGTCTATCCGCGCAGGCATCATTTGGATCAACTGCTATTTTGCCTTCGACAAAGACGCTCCTTATGGAGGATACAAGATGAGCGGATTTGGAAGAGATTATGGATTGGATGCCCTCCGAAAGTATCTTCAAGTTAAGTCAGTCGTGACTCCTATCTACAATTCTCCTTGGCTCTG 3035 0.4738 MTTLSNGHAPAKIPTVKFTKLFINGHFVDSLSGKTFETIDPRTGDVIARIAEATKEDVDLAVKAARDAFDNGPWPRMPGVARAKIMLKLADLIEENIEELAALDAIDAGKLYSWCKNVDIPQVAATLRYYAGAADKIHGETLKMAQELQGYTLMEPIGVVGHIIPWNFPSTMFFAKVSPALAAGCTMILKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDAVSFTGSTEVGREVMQAAARSNLKPVSLELGGKSPMIIFDDADADKAAELALLGIVFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKTQQGPQCDKKQFDKILSYIEHGKKQGAILLTGGKPIGDKGYYIEPTIFANVKEEMLIATDEIFGPVMALSKFKTIEEAIKKANNTRYGLAAGIVTKNIDTANTVSRSIRAGIIWINCYFAFGNDTPYGGYKMSGFGRDFGLDALHKSTPSLAPSAICFLSTTFLLGLVPAAETQTPSGIEMATLSHAKIPTIKFTKLFINGHFVDSVSGKTFETIDPRTGEVIARIAEATKEDIDLAVKAAREAFDNGPWPRMPGVARARIMLKYADLIEENIEELAALDTIDAGKLYSGCKAGEIPQVAATLRYYAGAADKIHGETLKMSRELQGYTLMEPIGVVGHIIPWNFPSSLFFAKVSPALAVGCTMILKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDAVSFTGSTEVGREVMQAAAKSNLKPVSLELGGKSPMIIFDDADVDTAAELALRGIVYNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPEVQQGPQCDKKQFDKILSYIEHGKRQGATLLTGGKPIGDKGYYIEPTIFAYVKEDMLIARDEIFGPVMALSKFKTIEEAIKKANNTTYGLAAGIVTKNIDTANTVSRSIRAGIIWINCYFAFDKDAPYGGYKMSGFGRDYGLDALRKYLQVKSVVTPIYNSPWL 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00613 1011 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 777 784 IPR029510 GO:0016491
Bva03g00613 1011 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 805 816 IPR016160 GO:0016491
Bva03g00613 1011 SUPERFAMILY ALDH-like 522 1007 IPR016161 GO:0016491
Bva03g00613 1011 Pfam Aldehyde dehydrogenase family 28 483 IPR015590 GO:0016491
Bva03g00613 1011 Pfam Aldehyde dehydrogenase family 539 1001 IPR015590 GO:0016491
Bva03g00613 1011 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Bva03g00613 1011 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 535 999 IPR016162 GO:0016491
Bva03g00613 1011 SUPERFAMILY ALDH-like 12 481 IPR016161 GO:0016491
Bva03g00613 1011 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 520 1011 - -
Bva03g00613 1011 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 3 482 - -
Bva03g00613 1011 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 781 970 IPR016163 GO:0016620
Bva03g00613 1011 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Bva03g00613 1011 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 482 IPR016162 GO:0016491
Bva03g00613 1011 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Bva03g00613 1011 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 520 1011 - -
Bva03g00613 1011 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00613 Bva-Chr3 3582240 3590256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00613 6 480 Aldehyde Dehydrogenase Gene Family AT3G24503 73.739 0.0 723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00613 03 3582240 3590256 Bva03g00613 03 3582240 3590256 BWGD