Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00600 ATGGAAAACCGCCTCAAAATGCGAATCTCTCGCATGTTCCGATCCTCGTTCGGGTCTTGCCGGACCCGAAACATCTCCGATGTAATGGAAAAGGCTGTCTTTGCCCCTCAAAACCAAAGCTTTCACCTCATTGAGCCATTTTCTCCCAAAGCTCGTCCGTTTCCATCCATTTGCAGACCCAAAGGCTCTGAAACATCCGAAACTGTAGACCACAAATGTATCATGTCGATTAAGGATTCGACGCCGCGGAGGAAAGTATCGGAATGGTCACCCCCCTTCGTTTGTAGCAATCTCGATGGTAGGTCTTGTCCTCCTGCTTCACCAATCACTACCTTCAATCCAATCTACGACAAATACTATGGTTTCAACGAGAAAGTTAGGAATTCCAAAAAgagtaagaagaaaaagatgaagaatacCCAGAAGAGAACCAAGTCCAGAGAGGTGTTACCATTTAGCTCTGACGCTAAAGACGAAAACTTTGGCGGCTATTGGTGGTATAGCAACGACGAAGACGACGAGGGAGAAGATGAAACAGATACCCTTTTCTCTTCCAAAAGCCTCTCTTCCGATTCCTCCAGGTCTCACGGCCGGTATCGTTCTCGCCGGAAATATCATGGCAGTAATCGGGTAACCTCCAGGAATCGGAGTTCTGAAATGGGTGTTATGCCATTGCAGGGGAAAGTGAAGGATACCTTCGCTATAGTGAAGCGTTCCAGTGATCCTTACAATGATTTTAGGACGTCAATGGTGGAAATGATTGTTGAGAAACAGATTTTCTCGCCCCGGGAATTGGAGAATCTATTGCAGTGTTTTATAACGCTGAattctcatcatcatcataagGTCATTGTTGAAGTTTTCACAGAGATTTGGGAGGCTCTGTTCTCTGACTGGTTTAGAAGTTA 908 0.4372 MENRLKMRISRMFRSSFGSCRTRNISDVMEKAVFAPQNQSFHLIEPFSPKARPFPSICRPKGSETSETVDHKCIMSIKDSTPRRKVSEWSPPFVCSNLDGRSCPPASPITTFNPIYDKYYGFNEKVRNSKKSKKKKMKNTQKRTKSREVLPFSSDAKDENFGGYWWYSNDEDDEGEDETDTLFSSKSLSSDSSRSHGRYRSRRKYHGSNRVTSRNRSSEMGVMPLQGKVKDTFAIVKRSSDPYNDFRTSMVEMIVEKQIFSPRELENLLQCFITLNSHHHHKVIVEVFTEIWEALFSDWFRS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00600 302 Pfam Transcriptional repressor, ovate 239 296 IPR006458 -
Bva03g00600 302 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 234 296 IPR006458 -
Bva03g00600 302 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 1 298 - -
Bva03g00600 302 MobiDBLite consensus disorder prediction 172 219 - -
Bva03g00600 302 MobiDBLite consensus disorder prediction 128 142 - -
Bva03g00600 302 MobiDBLite consensus disorder prediction 127 154 - -
Bva03g00600 302 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 298 IPR038933 GO:0045892
Bva03g00600 302 ProSiteProfiles OVATE domain profile. 235 294 IPR006458 -
Bva03g00600 302 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00600 Bva-Chr3 3507267 3508175 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva03g00600 Ovate 4.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00600 - - qsu:112040838 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00600 03 3507267 3508175 Bva03g00600 03 3507267 3508175 ECH