Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00595 ATGGCAACAACGCCGTCTCCCGGAGCTGCTCCGGCACCCACCTCTCCGCCGGCCCCCGATACTACTTCTCCTCCGTCGCCGGTGACTCCTTCTGCATCGCCTTCTTCGACACCGTCCACTCCCTCTGCACCGCCACCTGTCACTCCTTCAGCACCTCCAACGTCCACTCCCTCACCTCCTCCACCCTCCACGCCAACTCCTAGTACTCCGTCGCCGGAATCTTCAGCCTCACCCCCGCCTCCGTCTACTTCTACTCCTACTCCACCTAGTCCTGCGTCGAGGAGCCCCCCACCACCTCCCTCAAGCTCAGGCTCGCCTTCAACTCCGAATCGAAGCCCGCCTCCGCCTCATTCTTCGTCAACATCCCCGCCGCCCTCTTCATCGTCGTCCTCGGGTATATCAACTGGGGTCGTTGTCGGAATCGCCGTTGGGGCTGTGGCGATTCTTTTAGTGTTGAGTATTTTGTGCATATGTTgtaggaagaaaaagagaagacgTGATGAGGAATACTATATACCGCCGCCGCCACCACCACGGGGGCCTAAAGACGACGCATATGGTGGCCCACCTCGTCAGTGGCAGCATAATGCTCCCCCTCCTTCTGATCAAGTTGTCTCTGTGATGCCAAAGCCCACGCCTCCACCACCAGTTGCATTGAGACCACCGCAGTCACCAGTTTATGTTTCTCAACCCCCACCACCACCATCTTTCATGAGCAGCAGTGGTGGTTCTGGCTCCAACTATTCTGGTTCTGAAAATCCACTTCCGCCTCCTTCTCCAGGCTTTGCATTGAGTTTTTCAAAGAGCACATTTACGTATGAGGAGTTGGCAAGGGCAACTGATGGCTTCTCTGATGCCAACCTACTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGAATTCTTCCGAATGGGAAGGAGGTAGCTGTCAAGCAGCTAAAGGCTGGAAGTGGGCAGGGGGAACGTGAATTTCAAGCAGAAGTAGAAATAATTAGCCGAGTTCATCACAAGCATCTTGTTTCTTTGGTTGGATATTGCATTATTGGGTCACAGAGGCTGCTCGTTTATGAATTTGTCCCAAACAATACGTTAGAGTTCCACTTACATGGAAAAGGGCGACCTACCATGGATTGGCCCACAAGACTAAAAATTGCCTTAGGGTCTGCTAAAGGATTGGCATATCTTCACGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCTAATATACTCTTGgattttaactttgaagcaatGGTTGCTGATTTTGGACTTGCAAAGTTGTCTTCTGATGTTAATACCCATGTCTCCACTAGAGTGATGGGAACTTTTGGGTATCTGGCTCCAGAATATGCGTCAAGTGGAAAGCTCACTGACAAATCAGATGTATTTTCCTTTGGAGTTATGCTCCTCGAGTTGATTACTGGGCGGCGACCAGTTGACTCAAGTCATGCTTACATGGAGGATAGCTTAGTAGACTGGGCAAGGCCTGTACTCACACGTGCTTTGGAAGATGAGAATTTCGAATCTCTGGTTGATCCAAGGCTTCAAAATGAATATGACCACAATGAGATGGCTCGGATGATAGCATGCGCTGCAGCTTGCATTCGTCATTCAGCACGTCGTCGACCAAGGATGAGCCAGGTTGTTCGTGCTCTGGAAGGAGATGTTTCTCTAGCAGATCTTAACGAGGGAATTAGGCCTGGACACAGCACTATGTACAGTTCTCGGGGAAGCTCAGATTATGACACTGCACAGTACAAGGAGGACATGATAAAGTTCAGGAAAATGGCATTTGGAACTCAGGAGTATGGCGGCAGCAGCGAATACAGTGCACCTACAAGTGAGTGTGGTGTAAACCCATCTGGTTCAAGCAGTGAAGGCCAGAGCCGCCAGACCACCAGGGAAATGGAAATGTG 1928 0.499 MATTPSPGAAPAPTSPPAPDTTSPPSPVTPSASPSSTPSTPSAPPPVTPSAPPTSTPSPPPPSTPTPSTPSPESSASPPPPSTSTPTPPSPASRSPPPPPSSSGSPSTPNRSPPPPHSSSTSPPPSSSSSSGISTGVVVGIAVGAVAILLVLSILCICCRKKKRRRDEEYYIPPPPPPRGPKDDAYGGPPRQWQHNAPPPSDQVVSVMPKPTPPPPVALRPPQSPVYVSQPPPPPSFMSSSGGSGSNYSGSENPLPPPSPGFALSFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCIIGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFNFEAMVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSHAYMEDSLVDWARPVLTRALEDENFESLVDPRLQNEYDHNEMARMIACAAACIRHSARRRPRMSQVVRALEGDVSLADLNEGIRPGHSTMYSSRGSSDYDTAQYKEDMIKFRKMAFGTQEYGGSSEYSAPTSECGVNPSGSSSEGQSRQTTREMEM 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00595 642 MobiDBLite consensus disorder prediction 607 635 - -
Bva03g00595 642 PRINTS Proline rich extensin signature 22 38 - -
Bva03g00595 642 PRINTS Proline rich extensin signature 42 54 - -
Bva03g00595 642 PRINTS Proline rich extensin signature 3 15 - -
Bva03g00595 642 PRINTS Proline rich extensin signature 60 81 - -
Bva03g00595 642 MobiDBLite consensus disorder prediction 168 261 - -
Bva03g00595 642 SMART serkin_6 283 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00595 642 SUPERFAMILY Protein kinase-like (PK-like) 257 556 IPR011009 -
Bva03g00595 642 Pfam Protein tyrosine and serine/threonine kinase 288 556 IPR001245 GO:0004672|GO:0006468
Bva03g00595 642 MobiDBLite consensus disorder prediction 607 642 - -
Bva03g00595 642 MobiDBLite consensus disorder prediction 9 122 - -
Bva03g00595 642 Gene3D Phosphorylase Kinase; domain 1 262 358 - -
Bva03g00595 642 CDD STKc_IRAK 289 558 - -
Bva03g00595 642 ProSiteProfiles Protein kinase domain profile. 283 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00595 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Bva03g00595 642 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Bva03g00595 642 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 44 635 - -
Bva03g00595 642 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 44 635 - -
Bva03g00595 642 MobiDBLite consensus disorder prediction 1 134 - -
Bva03g00595 642 Gene3D Transferase(Phosphotransferase) domain 1 359 566 - -
Bva03g00595 642 MobiDBLite consensus disorder prediction 204 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00595 Bva-Chr3 3474666 3478813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00595 92 638 Trihelix Transcription Factor Family AT1G70460 51.087 1.25e-177 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva03g00595 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00595 - - gmx:100781944 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00595 03 3474666 3478813 Bva03g00595 03 3474666 3478813 ECH