Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00584 atggGGGAAGGTGAGGGTGGTGATTTCCCTCCGAAGAATGTAACATCGGATGCCGCACCAACCTTGTCGTTGGATGTTCCCGCGAAGAAGCTGGCAAGGCAGCTCGATTTCACTGGTTTTGGTGGGGTGTCTAGCAGTGTGGCCTTGCCAGAACACCCGCAATCACAGCTGCATCCTCAGACGCAGATGGTGTCCCAAAGTCAGCCACAGTCACGCCTACATCCACAAACACAGACAGTGACACAACCACCGGTGGTTGTGATGCCGGTGGTGCCACAGGCACCTCATTCTTCAGTGAGGGTTGGGAAACCAGAATCTCCAAAGTCAAGATCAAGACCTaactttgaaatgaaagatgcTACTCCAAAGAAGCAAAAACAGTGTAATTGTAAACACTCAAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATATTGTGATGGATGCAACTGTGTAAATTGTTTTAACAATGTTGAGAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTGGAGCGCAATCCAAATGCATTCAGGCCAAAAATTGCAAGCAGTCCTCATGGAACACGTGATAACAGGGAGGAAACCGGGGAAGTGTTAATATTAGGAAAGCACAACAAGGGTTGTCATTGTAAAAAATCAGGATGCCTCAAAAAGTACTGTGAGTGCTTCCAAGCCAACATTCTATGCTCGGACAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAAAGACAGGCTCTATTCCATGGGGATCAAAATAATAGCATGGCATACATCCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATCCCCTCCGATatctaagaaaagaaagggtcAAGAACTCTTCTTTGGGCCAGCAGCCAAGGATCCATCCATTGCCAGGCTTGGGCAATTTCAACAGGCAAACCATGTCAGAGCTTCCGTACCCTCCTCTTCCTTGTCTTCTATCCCAGGTGCTCGTGTTGGAACTGCAACATTAGGTCCTTCAAAATTTACATACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCAGTTCTGGTACTAGTTTCGGGACAGGCAGCAAAGACACTTGCAGACAAAAAACATTTAGTGGAAAAGCATGCAGAAGATCAGACAGATACCTCCCTTGCTTCTTCAACTCAGGAGCAATTGCCAAGTCAAAAGGAAGCTGATGTTGAAAAAGCTGTTGCTGATGATTGTTCAAGTGCAAACCAAACTGATAAAATCAGCCCAGATGACTCCAGCTCGGATGGTGCTGATGTCCCAAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGCGATGAACAAGATACAATGTTCATGACAGCTGCTTCCCCGAATAGGGCGATGGCCCATGCCTGCAACACATCTTCGCAGTCTCCTTATGGACAAGGCATGGCAGAGGTCTATGCAGAGCAAGAAAGAATTGTCCTGACAAAGTTTAGAGATTTTCTTAATAGGGTTATTACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCCAGAAGTGAATTAGAGAGCCAGAAGGATCCAATGAGCAATGGTGCTGGAAATGCCAGTACTGAGATGGCACCACAGCAGGGACCCACTAGTAATGGTGTTGCCAAAGCTGTTGCCCCTCCTGTGGCTACAACGACGAGTATGAGCACGATGACTTCCCCAGGTTTGGTCCCTAGTAATTTTGTTTCAGAAAATGGGGAAAGTAAGCCCAAGATTGAAAAGGAGACATG 1817 0.448 MGEGEGGDFPPKNVTSDAAPTLSLDVPAKKLARQLDFTGFGGVSSSVALPEHPQSQLHPQTQMVSQSQPQSRLHPQTQTVTQPPVVVMPVVPQAPHSSVRVGKPESPKSRSRPNFEMKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDNREETGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSDNCKCMDCKNFEGSEERQALFHGDQNNSMAYIQQAANAAITGAIGSSGYSSPPISKKRKGQELFFGPAAKDPSIARLGQFQQANHVRASVPSSSLSSIPGARVGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLADKKHLVEKHAEDQTDTSLASSTQEQLPSQKEADVEKAVADDCSSANQTDKISPDDSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPNRAMAHACNTSSQSPYGQGMAEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKDPMSNGAGNASTEMAPQQGPTSNGVAKAVAPPVATTTSMSTMTSPGLVPSNFVSENGESKPKIEKET 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00584 605 MobiDBLite consensus disorder prediction 530 605 - -
Bva03g00584 605 ProSiteProfiles CRC domain profile. 124 248 IPR005172 -
Bva03g00584 605 PANTHER TESMIN/TSO1-RELATED 25 93 IPR028307 -
Bva03g00584 605 PANTHER TESMIN/TSO1-RELATED 91 584 IPR028307 -
Bva03g00584 605 SMART CXC_2 123 163 IPR033467 -
Bva03g00584 605 SMART CXC_2 208 249 IPR033467 -
Bva03g00584 605 MobiDBLite consensus disorder prediction 48 84 - -
Bva03g00584 605 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 25 93 - -
Bva03g00584 605 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 91 584 - -
Bva03g00584 605 MobiDBLite consensus disorder prediction 389 455 - -
Bva03g00584 605 MobiDBLite consensus disorder prediction 41 118 - -
Bva03g00584 605 MobiDBLite consensus disorder prediction 530 562 - -
Bva03g00584 605 MobiDBLite consensus disorder prediction 1 21 - -
Bva03g00584 605 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 211 245 IPR005172 -
Bva03g00584 605 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 125 160 IPR005172 -
Bva03g00584 605 MobiDBLite consensus disorder prediction 571 595 - -
Bva03g00584 605 MobiDBLite consensus disorder prediction 103 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00584 Bva-Chr3 3417341 3425036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00584 1 545 CPP Transcription Factor Family AT4G29000 56.870 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bva03g00584 TCR 3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00584 - - gmx:100777698 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00584 03 3417341 3425036 Bva03g00584 03 3417341 3425036 ECH