Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00581 ATGGATCCTCCACCAAAGAGCTGGAGCATCCATACCCGAGCCGAGATCATCGCCAAGTACCAAGTTATGGAGCGGATTGGCTCCGGAGCTTACTCCGATGTCTACAGAGGGCGTCGTCTCTCCGACAACCTCATAGTCGCCCTTAAAGAAATTCATGACTACCAATCTGCTTTCCGAGAAATCGAGGCCTTGCAGATCCTCCAAAGTTCTCCTAACGTCGTTGTCTTGCACGAGTACTTCTTTCGCGAGGATGAGGACGCCGTTCTCGTTCTCGAGTACCTCAGGACTGACTTGTCCACTGTCATCAAAGACGCCAAGAAGGAAGGTAACGGCCTCACTGTTGGTGAGATTAAGAGGTGGATGATCCAAATTATTTCTGGGGTCGATGCGTGTCACAGAAATATGATCGTCCATAGAGATTTGAAGCCCAGTAATTTGTTGATTTCCGATGATGGTGTACTCAAGTTGGCCGATTTTGGACAGGCAAGGGTACTTATGGAGCCTGTATTTGATGCTTCGGATGAAAACCCACACTCCTACGAACCCGATACTTCAAACCAAGAGAGTTCCCTTCAACATTCTGTTGTTTTTCCTCAAACCGACAACATAAACCAAGAAGGATATGGAAATCAACAGCGGGCAGCTGTGAACCGGGAAgaatattttaaggttttagatGAGATGAAAACTAAGAGCTCAACAGATGATATTGATAAGGATACAAGCATCCATGATGGAAACACATCTTGTATGGCAACATGTACAACGAGTGACGTAGACGATGATATTTTGAAGACTTCTTTTAGTTATGAAGCAGAGGAGGGGGAAGACGATGGACAAGGTTGTCTCACATCATGTGTTGGCACTCGTTGGTTTAGGGCTCCTGAACTACTTTATGGATCCACAGATTATGGTTTGGAGATTGATCTCTGGTCATTGGGCTGCATCTTCGCAGAACTTTTGACTCTGGAGCCTTTGTTTCCTGGAACAGCCGATATAGATCAGCTCAGCAGAATAATAAATGTACTGGGCAACCTTAATGAGGAAACTTGTCCCGGTTGCTCCAAACTCCCTGATTATAGAACAATCTCATTTACTAAGGTGGAGAATCCTATTGGTCTAGAAGCCTGCCTGCCAAACCGCTCCCCTGATGAAGTCTCGCTTGTCAAAAAACTACTTTGCTACGATCCAGCTGGAAGATCTACAGCAATGGAGCTACTCAATGACAAGTATTTTAATGAAGAGCCTCTTCCAGTTCCCATTTCTCAGCTGCGGGTACCATTGACCAGGAATGGGCAAGACGAGGATTCCCCTTCTGGGTGGAATGATTACAATATGATGGATTCTGATTCTGATTTTGATGAATTCGGCCCCGTGAATATTACCAGAACTGGTACTGGTTTCTCCATACAGTTCCCTTG 1421 0.4511 MDPPPKSWSIHTRAEIIAKYQVMERIGSGAYSDVYRGRRLSDNLIVALKEIHDYQSAFREIEALQILQSSPNVVVLHEYFFREDEDAVLVLEYLRTDLSTVIKDAKKEGNGLTVGEIKRWMIQIISGVDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARVLMEPVFDASDENPHSYEPDTSNQESSLQHSVVFPQTDNINQEGYGNQQRAAVNREEYFKVLDEMKTKSSTDDIDKDTSIHDGNTSCMATCTTSDVDDDILKTSFSYEAEEGEDDGQGCLTSCVGTRWFRAPELLYGSTDYGLEIDLWSLGCIFAELLTLEPLFPGTADIDQLSRIINVLGNLNEETCPGCSKLPDYRTISFTKVENPIGLEACLPNRSPDEVSLVKKLLCYDPAGRSTAMELLNDKYFNEEPLPVPISQLRVPLTRNGQDEDSPSGWNDYNMMDSDSDFDEFGPVNITRTGTGFSIQFP 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00581 473 Gene3D Transferase(Phosphotransferase) domain 1 10 197 - -
Bva03g00581 473 Pfam Protein kinase domain 20 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00581 473 Pfam Protein kinase domain 280 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00581 473 ProSiteProfiles Protein kinase domain profile. 20 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00581 473 MobiDBLite consensus disorder prediction 172 192 - -
Bva03g00581 473 Gene3D Transferase(Phosphotransferase) domain 1 271 414 - -
Bva03g00581 473 SMART serkin_6 20 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00581 473 PANTHER CYCLIN-DEPENDENT KINASE 10 13 432 - -
Bva03g00581 473 SUPERFAMILY Protein kinase-like (PK-like) 4 429 IPR011009 -
Bva03g00581 473 PANTHER CELL DIVISION PROTEIN KINASE 13 432 - -
Bva03g00581 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Bva03g00581 473 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00581 Bva-Chr3 3399176 3401535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00581 4 473 Core Cell Cycle Gene Families AT4G28980 65.966 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Bva03g00581 Pkinase 2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00581 - - mtr:MTR_8g103240 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00581 03 3399176 3401535 Bva03g00581 03 3399176 3401535 BWGD
Bva03g00581 03 3399176 3401535 Bva03g00581 03 3399176 3401535 ECH