Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00578 atGAATAGAGGTGTTCTTCAGAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTAACTGGTGGAACATGAATAGCATGAGACCACCTATGAGTACTCAACAAGCTGCTTCTCATCCTTTCTTGTCCACTCCTTCaaactttcttatttctcCATATGCAcccacttcttcttcttcttcttcactccCTATCCCTTCTTGGCAGCAAGAGCTTCCAGCTGAGTCTTGGAGCCAACTGCTCATGGGTGGTGGTGGGCTGGTGGCTGAGGAAGATAAGGGAGGTGCTGTGGGCCAGTTTCAGCCGAAGAAGTTGGAGAATTGGGAAGAACAAATGCTATCTCATCCAAACGCTCCTCTTGTTGATGTCAAGCAAGAGAGTTCTGTAAACAGCTATGTGTACGGACAAGGGAATGAAGAATTTCAGGCAGCTGCTAAGCCTGCAGCTGCTTGGTCTCAAATGGTGACAGCTTCTTCTCCAAAATCTTGTGTGACCAGTTTCAGCAGCAACATGTTGGATTTCTCTAACAGTAAGACCGATGTGAGGCATCCTCCCCCAGATCGATCTTCTGAATGTAACAGCACTGCAGCTGCTGGGGCAGTGAAGAAAGCTAGGGTTCAACAGTCCACAAACCAGTCTACTTTCAAGGTTAGGAAGGAGAAACTGGGTGATAGAATTACAGCCCTTCATCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCTATTGGGTATGTCAGATTCCTTCAGAGTCAAATCGAGGCCCTTAGCTTACCATACCTAGGCAGTGGATCGGGAAAGATGAGGCAGCAACAACAATCtgTTCAAGCAGAGAAGTATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACTGCTTGAAGAGGAAAGCAGCTAGTGAGcaggATTCTCAAGAAGAACCAAAGAAGGACCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTACAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCTCCGGCGCTCGGCGGGGCCGGCGGCTTCCAGTA 1070 0.4617 MNRGVLQSSPVQQMMAGNPNWWNMNSMRPPMSTQQAASHPFLSTPSNFLISPYAPTSSSSSSLPIPSWQQELPAESWSQLLMGGGGLVAEEDKGGAVGQFQPKKLENWEEQMLSHPNAPLVDVKQESSVNSYVYGQGNEEFQAAAKPAAAWSQMVTASSPKSCVTSFSSNMLDFSNSKTDVRHPPPDRSSECNSTAAAGAVKKARVQQSTNQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYVRFLQSQIEALSLPYLGSGSGKMRQQQQSVQAEKYCIFPEDPGQLLNENCLKRKAASEQDSQEEPKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGAGGFQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00578 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 216 266 IPR036638 GO:0046983
Bva03g00578 356 PANTHER OS05G0228400 PROTEIN 16 340 - -
Bva03g00578 356 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 340 - -
Bva03g00578 356 Gene3D - 205 284 IPR036638 GO:0046983
Bva03g00578 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 206 255 IPR011598 GO:0046983
Bva03g00578 356 CDD bHLH_AtbHLH_like 214 263 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00578 Bva-Chr3 3385014 3388501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00578 1 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.070 5.86e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00578 - - gmx:100785156 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00578 03 3385014 3388501 Bva03g00578 03 3385014 3388501 BWGD
Bva03g00578 03 3385014 3388501 Bva03g00578 03 3385014 3388501 ECH