Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00577 ATGTCTGTACCATTGGAGCACGACTACATAGGCTTAGCAGAGGTTCCTTCAATGGAAAGCTCTGACAAGTTTTCTGAGAGGAGCAATGGGTTGAAGTTGAACCTCAGGGCCACTGAGCTGCGACTTGGCTTACCTGGCTCGGAGTCACCAGAGAGGGATACTGGTGTGGAGGACAAGAATGGGTACCATTCAGGAGCGCTCAAGAGCTTGGTTTCTGGGGCCAAGAGGGGTTTCTCGGACGCCATTGACGGTGGTTCTGGCAAGTGGGTTCTCTCTGGAAATGGTGGATCTGAAGTGGGTATGGGTAAAGATGGTAACTTGTTCTCTCCTAGGGGCGTTTCTTCTGGCAAGGCTCTTGCTGGTGCTGGGCCAGAGTGTAACAAACAGCCAACTGGTGTGGGTGCAACAGCTGTGAAAGATAGTGTTCCACAGTCGCCAAAGCCATTGCATGAGAAAAAACCCCAGCTTTCTGCTCCTGCCGCAAAGGCTCAGGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGGCTTCTCACCCTCAAAAGAATGACGATGAAGCAGAAGCCAAATCTGGTTGCCTTTATGTAAAAGTCAGTATGGATGGGGCACCATACTTGAGGAAAGTGGATCTCAAAAACTTTAACAGTTACATGGAACTCTCGTCAGCACTAGAAAAGATGTTCAGTTGCTTTACGATCAGTCAATGCGGCTCCCATGGAGTTTCTAGTAAAGATAAGTTGAGTGAAAGTAGATTGATGGATCTGCTTCACGGTTCAGAATATGTGCTAACCTATGAAGACAAGGATGGTGATTGGATGCTGGTTGGTGATGTTCCCTGGGAGATGTTCACTGATTCTTGCAAGAGATTGAGGATAATGCAGAGTTCTGAAGCAATTGGACTAGCACCAAGAACCATGGAAAAGTGCAGAAGTGGCAACTG 950 0.48 MSVPLEHDYIGLAEVPSMESSDKFSERSNGLKLNLRATELRLGLPGSESPERDTGVEDKNGYHSGALKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEVGMGKDGNLFSPRGVSSGKALAGAGPECNKQPTGVGATAVKDSVPQSPKPLHEKKPQLSAPAAKAQVVGWPPIRSFRKNSMASHPQKNDDEAEAKSGCLYVKVSMDGAPYLRKVDLKNFNSYMELSSALEKMFSCFTISQCGSHGVSSKDKLSESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMQSSEAIGLAPRTMEKCRSGN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00577 316 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 25 309 IPR003311 GO:0005634|GO:0006355
Bva03g00577 316 Pfam AUX/IAA family 38 307 IPR033389 -
Bva03g00577 316 Gene3D - 190 309 - -
Bva03g00577 316 PANTHER AUXIN-INDUCED PROTEIN 25 309 - -
Bva03g00577 316 MobiDBLite consensus disorder prediction 119 162 - -
Bva03g00577 316 SUPERFAMILY CAD & PB1 domains 193 296 - -
Bva03g00577 316 ProSiteProfiles PB1 domain profile. 196 298 IPR000270 GO:0005515
Bva03g00577 316 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00577 Bva-Chr3 3360847 3363705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00577 172 314 B3 DNA Binding Superfamily AT5G62000 27.972 9.51e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva03g00577 AUX_IAA 7.9e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00577 K14484 - zju:107431954 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00577 03 3360847 3363705 Bva03g00577 03 3360847 3363705 BWGD
Bva03g00577 03 3360847 3363705 Bva03g00577 03 3360847 3363705 ECH