Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00568 ATGGCATCTTCTCTTCGACCCTCTCTCTCGTCCTTCAGATTATCCGGTGCTTCTTCCCGTTTCtgtccttctctctcttttcactTCCCATCTCGACGTCTCTCAGTTTTTCATTTCACTAGCGCTGTTCCACTGTCTCATAGTTTTGGCCTAAAAGCCTCGAGGTTGTTGAGAAGAGATGGTAACCGCATGGGATTGATGGCATCTGGGAATGTGGCCCAATCAAGCACTGATGCAACACCAGAAAATGTACTGGAGTGGGTCAAACAGGACAAGCGAAGAATGCTTCATGTTGTATATCGTGTTGGGGACTTGGACAGGACCATAAAATTTTATACAGAGTGTCTGGGAATGAAGCTTCTAAGAAAGCGTGACATACCAGAGGAGAGATACACTAATGCCTTTCTTGGATATGGACCTGAAGATTCACACTTTGTTGTTGAATTGACTTACAATTACGGGGTTGACAAGTATGATATTGGAACTGGATTTGGCCACTTTGGTATTGCTGTTGAGGATGTTGCAAAAACAGTTGAACTCATAAAAGCTAAGAGTGGCAAAATAACTAGAGAACCTGGTCCTGTAAAAGGTGGTAGCACAGTAATAGCCTTTATTGAAGATCCTGATGGTTATAAATTTGAACTTCTGGAAAGAGGTCCAACTCCTGAGCCTCTATGCCAAGTAATGCTTCGAGTGGGTGATCTTAATCGTTCCATAGAATTCTATCAGAAGGCTTTTGGTATGGAGCTTCTTCGTATACGAGATAATCCAGAGTACAAGTATACCATAGCGATACTGGGTTATGGTCCAGAAGATAAAAGTGCTATTCTGGAGTTGACATACAATTATGGAGTCACTGAGTATGACAAAGGAAATGCTTATGCTCAGATTGCTATAGGCACAGATGATGTGTACAGAACTGCAGAAGCAATTAAACTTGCTGGAGGAAAGGTTACCCGGGAACCTGGACCGGTACCTGGTATCAACACAAAAATCACCGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTCCACAAGGAGTTGGAGTA 1070 0.4187 MASSLRPSLSSFRLSGASSRFCPSLSFHFPSRRLSVFHFTSAVPLSHSFGLKASRLLRRDGNRMGLMASGNVAQSSTDATPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELIKAKSGKITREPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYQKAFGMELLRIRDNPEYKYTIAILGYGPEDKSAILELTYNYGVTEYDKGNAYAQIAIGTDDVYRTAEAIKLAGGKVTREPGPVPGINTKITACLDPDGWKSVFVDNVDFHKELE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00568 356 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 94 218 IPR037523 -
Bva03g00568 356 Gene3D - 221 356 IPR029068 -
Bva03g00568 356 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 225 347 IPR029068 -
Bva03g00568 356 CDD GlxI_Ni 95 216 - -
Bva03g00568 356 TIGRFAM glyox_I: lactoylglutathione lyase 83 227 IPR004361 GO:0004462|GO:0046872
Bva03g00568 356 TIGRFAM glyox_I: lactoylglutathione lyase 225 352 IPR004361 GO:0004462|GO:0046872
Bva03g00568 356 ProSitePatterns Glyoxalase I signature 1. 97 118 IPR018146 GO:0004462|GO:0046872
Bva03g00568 356 PANTHER LACTOYLGLUTATHIONE LYASE 21 356 - -
Bva03g00568 356 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 94 220 IPR029068 -
Bva03g00568 356 Gene3D - 66 219 IPR029068 -
Bva03g00568 356 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 227 342 IPR004360 -
Bva03g00568 356 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 95 215 IPR004360 -
Bva03g00568 356 ProSitePatterns Glyoxalase I signature 1. 227 248 IPR018146 GO:0004462|GO:0046872
Bva03g00568 356 ProSitePatterns Glyoxalase I signature 2. 161 173 IPR018146 GO:0004462|GO:0046872
Bva03g00568 356 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 224 348 IPR037523 -
Bva03g00568 356 PANTHER LACTOYLGLUTATHIONE LYASE 21 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00568 Bva-Chr3 3309189 3313518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00568 227 345 Calmodulin-binding Proteins AT1G08110 28.276 1.54e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00568 K01759 - pvy:116108535 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00568 03 3309189 3313518 Bva03g00568 03 3309189 3313518 BWGD
Bva03g00568 03 3309189 3313518 Bva03g00568 03 3309189 3313518 ECH