Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00542 ATGACAAAATTAAATCCGATATGTGCCAAAATGccatttttctcccttttctcCTTCCTCCTTCTCCACCTCTTCAACTCTGCACACTCTCAGACTCAGCTCTATGATCAAGAGCACGCCGTCCTGTTGAAGCTAAAGCAATACTTAGAAAATCCATCATTTCTCAGTCACTGGACCCCTTCAAACTTAACCCAGTGCTCTTGGCCCGAGATCACCTGCAGAAATGGCTCTGTCACTGGACTGGCTTTGGTTAACACCAATATTACCCAACCGTTTCCACCTTTCATCTGTGACCTCCAAAACCTCACACGCattgattttcaattaaacTTCCTTCCTGGGGAGTTCCCAACTTCTCTGTACAAATGCTCCGTGCTTGAGTATCTCGACTTGTCGCAGAATAATTTCGTGGGTAAAATTCCAGATGACATTGACCGTTTGTCTAATCTGCGTTTTCTCAACCTTGGTGCCAACAATTTCTCCGGCGACATTCCGGCCAGCATCGGGCGGTTAAAGGAGCTTACAAATCTTCAACTTTTTCAATGTCAATTCAACGGTACCATCCCGGTAGAAATTGGCAACTTGTTCaatcttgaatttttatttttagccaTCAACAGCGAACTGCCTCCCACAAACTTGCCGGTTAGCTTCACCCAGTTGCAGAATTTGAAGAATCTATTAATGTACGATACTAACCTGATTGGGGAAATCCCAGAAACCATTGGGGAAATGGTGGCTTTGGAGTACGTTGACTTATCGGGTAACCAATTAACTGGGGAAATTCCCAGCGGTTTCTTCACTCTGAAGAATCTAACAGTACTGTTTCTTCACAACAACAGGCTTTCAGGTACGTTACAGATGCCAGCGGTGGTTGAAGCATTAAACTTGACCATCCTTGATGTTTCAGAAAATAATCTCACCGGGAACATACCAGAGGATCTCGGAAGTCTTCAAAAACTAACGGGGTTTGGTTTGCAAATGAATCAGTTATCTGGTGAGGTACCTGAAAGCCTAGCCCGTCTTCCAGCTCTGATAGATTTCATAGTTTTTAGCAACAACTTGTCAGGCCCTCTGCCTCTTGAGTTAGGCCTCCACTCGAGCCTTAGGAAATTTGAGGTTGCATCTAATAGCTTTACAGGACCCTTGCCAGTCAACTTATGCTTTCACGGTAAGTTGGAAGGATTAACAGCTTTCGACAACAAACTGAGTGGGGAGTTGCCAGAATCATTGGGAAATTGCCCTAGTCTCGGAGTATTGGAAATTTACAATAATGAGTTTTCCGGCAGCATACCAAGCGGCCTTTGGACATCTCTCAATTTGACAAGGTTCAGGATAAATGAGAACAAGTTTACTGGTGAGCTTCCTCAAAGATTGTCTTCGAACCTTTCATTCTTGTCCATAAGTCACAACCAGTTTTCTGGTAGAATTCCAGCTGGAGTATCTTCCTGGACTAACGTGGTGGTCTTTAACGCCAGCAAGAACCTCTTCAATGGAAGTATTCCACAAGAGCTAACAGCTCTTCCCCGGTTGACAACTCTGCTGCTTGATCAGAATCACTTCGAAGGGCCGCTTCCATCAGAAATAATATCATGGAAGTCTTTAACAACTCTAAACTTGAGCCGAAATCAGCTCTCTGGCCAAATCCCAGATGAAATTGGTCGATTGCCTGTCCTTTCCGTGCTTGACTTGTCCCAAAATCAATTCTCTGGCCAAATTCCATCTGAATTAGACAGTCGCAGAATTACAAGTCTCAATCTCTCCTCCAACCAATTAACTGGTAGGATTCCTAGTGAATTCGAAAATCTTGCTTATGATACAAGCTTTTTAGACAATTCTGGTCTCTGTGCTGATTCTCCAGTACTAAACATCACTTTATGCAATTCTGGGATTCAAAAATCAACCAAGAGGTCGTCTGTGTCTCTTGCATTGATCATTAGCCTGGCGGTTGTAGGCTCTTTAGCAGCTTTCTTGTCTTTACTGTTGGTGATCAGAGTCCACaggaaaagaaagcaaggaTTTGGCTCCTCCACATGGAAGCTCACTTCCTTTCAGAAGCTGGGTTTTACAGAATCAAACATTCTTTCAGAACTCACAGATCGTAACATAATAGGCAGTGGTGGATATGGTACAGTATACCGTGTTGCGATCAACCAGAAAGGTGATTTTGTTGCTGTGAAAAAGACAATGAGTAGCAGAAAGTTGGAAAACAAGCTTGAGAATGCATTCCTTGCAGAAGTTAGAACACTGAGCTCCATTCGTCATAACAACATTGTGAAGTTACTGTGTTGTATTTCTGGTGAAAGTTCTAAGCTCCTCGTGTATGAATATCTTGAAAACCGTAGCCTTGACCAATGGCTGCACAGAAAGAGAGGAACATCAGCTATGTCTGGTTCAGTCCAGCATGCGGTCCTTGATTGGCCAAAGAGATTGCAGATAGCCATTGGTGCTGCTCAAGGCCTGAGCTACATGCACCACGACTGCTTACCACCCATTATTCATAGGGATATAAAATCAAGCAACATTCTGCTGGATTCTGAATTCAATGTCAAAATTGCTGATTTTGGTCTGGCTAGGATGCTGATGAATCCAGGAGAACTTGCTACCATGTCAGCTGTGACAGGCTCATTTGGCTATATTGCTCCAGAATACGCTCAAACGACCCGAGTGAATGAGAAAATTGATGTATATAGTTTTGGGGTTGTCCTATTGGAACTGACTACAGGAAAAGAAGCTAATTATGGAGATGAGTACTCATCCTTGGCTGAATGGGCATGGCGCCATGTTCAAGTAGGAAATTCTGCTGAAGATGTTCTAGatgaagaaataaaggaaCCCTCTTATGTAGAGGAAATGTGCTGCGTCTTCAAACTTGGAGTCATGTGTACCACAACACTGCCATCTAGTAGACCGTCCATGAAGGAGGTTGTGCAGATATTGCTCCGATGCAGCAGTCCACTCCTCTATGGAGAGAAGAATCTTAGAGATTACTATGATGTTGTTCCTCTACTTAAGAATTCCAAAAGAGAGGATAGGTCGGATGTTGATAATGATAGCTA 3059 0.4227 MTKLNPICAKMPFFSLFSFLLLHLFNSAHSQTQLYDQEHAVLLKLKQYLENPSFLSHWTPSNLTQCSWPEITCRNGSVTGLALVNTNITQPFPPFICDLQNLTRIDFQLNFLPGEFPTSLYKCSVLEYLDLSQNNFVGKIPDDIDRLSNLRFLNLGANNFSGDIPASIGRLKELTNLQLFQCQFNGTIPVEIGNLFNLEFLFLAINSELPPTNLPVSFTQLQNLKNLLMYDTNLIGEIPETIGEMVALEYVDLSGNQLTGEIPSGFFTLKNLTVLFLHNNRLSGTLQMPAVVEALNLTILDVSENNLTGNIPEDLGSLQKLTGFGLQMNQLSGEVPESLARLPALIDFIVFSNNLSGPLPLELGLHSSLRKFEVASNSFTGPLPVNLCFHGKLEGLTAFDNKLSGELPESLGNCPSLGVLEIYNNEFSGSIPSGLWTSLNLTRFRINENKFTGELPQRLSSNLSFLSISHNQFSGRIPAGVSSWTNVVVFNASKNLFNGSIPQELTALPRLTTLLLDQNHFEGPLPSEIISWKSLTTLNLSRNQLSGQIPDEIGRLPVLSVLDLSQNQFSGQIPSELDSRRITSLNLSSNQLTGRIPSEFENLAYDTSFLDNSGLCADSPVLNITLCNSGIQKSTKRSSVSLALIISLAVVGSLAAFLSLLLVIRVHRKRKQGFGSSTWKLTSFQKLGFTESNILSELTDRNIIGSGGYGTVYRVAINQKGDFVAVKKTMSSRKLENKLENAFLAEVRTLSSIRHNNIVKLLCCISGESSKLLVYEYLENRSLDQWLHRKRGTSAMSGSVQHAVLDWPKRLQIAIGAAQGLSYMHHDCLPPIIHRDIKSSNILLDSEFNVKIADFGLARMLMNPGELATMSAVTGSFGYIAPEYAQTTRVNEKIDVYSFGVVLLELTTGKEANYGDEYSSLAEWAWRHVQVGNSAEDVLDEEIKEPSYVEEMCCVFKLGVMCTTTLPSSRPSMKEVVQILLRCSSPLLYGEKNLRDYYDVVPLLKNSKREDRSDVDNDS 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00542 1019 ProSiteProfiles Protein kinase domain profile. 698 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00542 1019 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Bva03g00542 1019 ProSitePatterns Protein kinases ATP-binding region signature. 704 728 IPR017441 GO:0005524
Bva03g00542 1019 SMART serkin_6 698 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00542 1019 Gene3D Ribonuclease Inhibitor 35 186 IPR032675 -
Bva03g00542 1019 Pfam Leucine Rich repeats (2 copies) 248 282 IPR025875 -
Bva03g00542 1019 SUPERFAMILY Protein kinase-like (PK-like) 690 980 IPR011009 -
Bva03g00542 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Bva03g00542 1019 Pfam Leucine Rich Repeat 582 603 IPR001611 GO:0005515
Bva03g00542 1019 Gene3D Phosphorylase Kinase; domain 1 682 777 - -
Bva03g00542 1019 CDD STKc_IRAK 704 982 - -
Bva03g00542 1019 Pfam Protein kinase domain 701 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00542 1019 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 15 1012 - -
Bva03g00542 1019 SMART LRR_typ_2 147 171 IPR003591 -
Bva03g00542 1019 SMART LRR_typ_2 245 269 IPR003591 -
Bva03g00542 1019 SMART LRR_typ_2 508 532 IPR003591 -
Bva03g00542 1019 SMART LRR_typ_2 556 580 IPR003591 -
Bva03g00542 1019 SUPERFAMILY L domain-like 46 380 - -
Bva03g00542 1019 SUPERFAMILY RNI-like 291 604 - -
Bva03g00542 1019 Gene3D Ribonuclease Inhibitor 296 626 IPR032675 -
Bva03g00542 1019 Gene3D Ribonuclease Inhibitor 187 295 IPR032675 -
Bva03g00542 1019 Gene3D Transferase(Phosphotransferase) domain 1 778 990 - -
Bva03g00542 1019 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00542 Bva-Chr3 3143385 3146880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00542 32 1015 Receptor kinase-like Gene Family AT5G25930 50.856 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva03g00542 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00542 - - gmx:100785907 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00542 03 3143385 3146880 Bva03g00542 03 3143385 3146880 ECH