Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00538 ATGGGAAGGGCCACAAGGTGGTTGAAGAGCCTGTTTGGGATAAAGAATGACAAAGACCaccaagaaaattcaaattccgGCCACCGGAGAGACAAGAAATGGCATTCAGAAATAGACCCCCGTGGTTTTTGCAACAATCCAGCGACTATACCACCCAACATTTCACCTGCAGAGGCTGCTTGGCTACAATCATTCTACACCGAGACAGGGAAGGAGCAGAATAAGCACGCAATTGCGGTAGCTGCCGCCACGGCAGCAGCAGCTGATGCCGCAGTGGCTGCAGCGCAAGCCGCCGTGGCAGTGGTTAGGCTTACAAGCCACGGCAGAGGCACCATGTCCGGTGGTGGGCATGAGAGATGGGCTGCTGTCAAGATTCAAACAGTATTTAGGGGATTCCTGgCTAAGAAGGCTCTGCGAGCCTTGAAAGCATTGGTGAAGTTGCAAGCTCTGGTGAGAGGCTATCTAGTACGGAAGCAGGCAGCAGCAACCCTGTATAGTATGCAGGCTCTAATTAGAGCTCAAGCAACGGTTCGGTCCCAGAAAGCACGCCTGCTTTTGAACAAAAACAGTGAAGCTCACAGATTTGAAACAAGAGCAAGATCCATGGAAAGATTTGATGAGACCAGGAGTGAGTTCACAAGTCCCATCCACAGTAGAAGGCTGTCATCTTCTTTCGATGTACATGGAACaatcagcagcagcagcattGATGGGATTGGGAGCCCCAAAATAGTCGAGGTTGACAATTGGACTGGGAGGCCTAAATCGAGGTGTCGCCGGAGCAGTACCAACACGTCAATGTCGGATTTTGGCGACGACCCACCATTTCTCCAAGCAGTTTCTTCTCCTCTCCCATGCCTATGTCGAACCCCCGGTCGATTATCCATACCAGATCGCCGGAATTTCCAGGACTCCGATTGGGGCTTAACTGGGGAAGAGTATAGATTCTCTACAGCTCAGAGTACTCCCCGTTTCGCCTACTCTCATGCCTCTTTGGATCCATTCACACCTTCCAGTGACAACTTTTTCCGGCATTATGGCAATGTGCCAAACTACATGACCAATACTCAATCTTTCAAGGCCAAGTTGAGGTCTCACAGTGCTCCAAAACAAAGACCAGAGCCGGGTTTCAAGAAGAGGCTTTCCGTGGATGAAGTTATGCAGTCTAGGACGAGTTTAAGTGGGGTTCCAATGCAAAGTTCTTGTTCGCATGTTCAACAagtcattaattttaagaatgcTGTGATGAGTAAGCTTGATAGGTCTGCAGAATTGGTTAGGGAACCAGATAGAAGAAGCCACTTTCAGAGAATGCATTA 1319 0.4738 MGRATRWLKSLFGIKNDKDHQENSNSGHRRDKKWHSEIDPRGFCNNPATIPPNISPAEAAWLQSFYTETGKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMSGGGHERWAAVKIQTVFRGFLAKKALRALKALVKLQALVRGYLVRKQAAATLYSMQALIRAQATVRSQKARLLLNKNSEAHRFETRARSMERFDETRSEFTSPIHSRRLSSSFDVHGTISSSSIDGIGSPKIVEVDNWTGRPKSRCRRSSTNTSMSDFGDDPPFLQAVSSPLPCLCRTPGRLSIPDRRNFQDSDWGLTGEEYRFSTAQSTPRFAYSHASLDPFTPSSDNFFRHYGNVPNYMTNTQSFKAKLRSHSAPKQRPEPGFKKRLSVDEVMQSRTSLSGVPMQSSCSHVQQVINFKNAVMSKLDRSAELVREPDRRSHFQRMH 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00538 439 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Bva03g00538 439 SMART iq_5 140 161 IPR000048 GO:0005515
Bva03g00538 439 SMART iq_5 117 139 IPR000048 GO:0005515
Bva03g00538 439 MobiDBLite consensus disorder prediction 17 47 - -
Bva03g00538 439 Gene3D - 117 165 - -
Bva03g00538 439 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Bva03g00538 439 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 422 - -
Bva03g00538 439 MobiDBLite consensus disorder prediction 252 273 - -
Bva03g00538 439 MobiDBLite consensus disorder prediction 256 271 - -
Bva03g00538 439 PANTHER IQ-DOMAIN 5-RELATED 1 422 - -
Bva03g00538 439 MobiDBLite consensus disorder prediction 17 39 - -
Bva03g00538 439 Pfam Protein of unknown function (DUF4005) 319 397 IPR025064 -
Bva03g00538 439 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Bva03g00538 439 Pfam IQ calmodulin-binding motif 119 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00538 Bva-Chr3 3117773 3120082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00538 1 398 IQD Protein Family AT3G16490 50.244 1.63e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00538 - - zju:107432812 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00538 03 3117773 3120082 Bva03g00538 03 3117773 3120082 ECH