Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00537 ATGTCAAATTTGCATTACATTTCTTCTGtatttcttgttcttcttattcttctgCAGAATCCCAACACAACACTGTGCCATACCAAGGGAATTAGGCCGAAGCGTTCTCCCAAGAATGGGTTAACGGTTAACATGACCCAGGTCCAAAATTCTCAACAGCAATTCATGAAATGGGTCAAGTTTGTTGGTAGCCTCAGACACTCTGTTTTTAAGACAGCCAAAAATAAGCTCTTTCCCTCTTACACTCTGCACGTTGCCAAGAAACATGGAGCTGGAGATTTTACAACAATTCAAGGAGCCATTGATTCTCTTCCATTCATTAATCTTGTAAGAGTGGTCATCAAGGTTCATGAAGGGGTTTACACGGAGAAGGTTAATATACCTCCTCTGAAAGGCTTCATAACCATAGAAGGAGCAGGTGCTGATAAAACAATTGTTCAATGGGGAGACAGTGCTCAAACCCGGGGGCCAAGAGGGCAGCCACTGGGTACCTACGGTTCTGCAACCTTTGCTGTGAATTCAGCTTATTTCATTGCAAAGAACATCACATTCAAAAACAAGACCCCTGTTCCTGCACCAGGAGCAGTTGGAAAGCAAGCAGTGGCACTGAGAATTTCAGCAGACAATGCAGCATTCTACGGCTGCAAATTCGTAGGAGCACAAGACACACTGTATGATCATGTGGGTAGGCACTATTATAAGGATTGTTACATCGAAGGCTCTGTTGATTTCATATTCGGCAACGCCCTGTCTCTATTCGAGGGATGTCACGTGCATGCTATAGCACAGTACACAGGGGCCCTAACAGCACAAGGAAGGAGCAGTCTATTAGAGGACACGGGGTTCTCGTTTGTGCACTGTAAGGTCACGGGCTCAGGAGCACTGTACCTTGGGAGGGCTTGGGGTCCTTTTTCTCGCGTTGTCTTTGCTTATACTTATATGGACAACATCATCATTCCCAGAGGCTGGTATAATTGGGGTGACCCTAACCGTGAAATGACTGTATTCTATGGGCAATACAAATGCACAGGACCAGGGGCTGGCTATGCAGGAAGAGTATCCTGGTCAAGAGAGCTCACTGATGAGGAGGCTAAACCTTTTATCTCCCTTAGCTTCATTGATGGTTTTGAGTggatcaaattcaaata 1148 0.4408 MSNLHYISSVFLVLLILLQNPNTTLCHTKGIRPKRSPKNGLTVNMTQVQNSQQQFMKWVKFVGSLRHSVFKTAKNKLFPSYTLHVAKKHGAGDFTTIQGAIDSLPFINLVRVVIKVHEGVYTEKVNIPPLKGFITIEGAGADKTIVQWGDSAQTRGPRGQPLGTYGSATFAVNSAYFIAKNITFKNKTPVPAPGAVGKQAVALRISADNAAFYGCKFVGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQYTGALTAQGRSSLLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPRGWYNWGDPNREMTVFYGQYKCTGPGAGYAGRVSWSRELTDEEAKPFISLSFIDGFEWIKFK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00537 382 Pfam Pectinesterase 87 375 IPR000070 GO:0030599|GO:0042545
Bva03g00537 382 Gene3D - 80 382 IPR012334 -
Bva03g00537 382 PANTHER PECTINESTERASE 9 380 - -
Bva03g00537 382 SUPERFAMILY Pectin lyase-like 79 380 IPR011050 -
Bva03g00537 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 380 - -
Bva03g00537 382 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00537 Bva-Chr3 3113332 3116208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00537 2 379 Carbohydrate Esterase AT5G47500 43.536 1.64e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00537 K01051 - gmx:100793773 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00537 03 3113332 3116208 Bva03g00537 03 3113332 3116208 ECH