Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00534 ATGGGGAACAAAATTGCGCGCACAACACAAGTTTCGGCTTCGGAATACTATCTTCATGACCTACCCTCTACATATAATCTCGTCCTGAAGGAAGTTTTGGGTCGAGGCCGTTTCTTCAAGTCGATTCAGTGTAAGCATGACGAGGGTTTGGTTCTGGTCAAGGTCTATTTCAAGCGTGGTGATTTCATTGATCTCAAAGAGTACGAACGTCGTCTGTCCCAGATCAGAGACATTTTCCGTGGCATTGATCACCCTCACGTGTGGCCCTTCCAGTTTTGGCAAGAAACAGATAAAGCAGCATACCTTTTGAGGCAATATTTCTTCCATAATTTGCACGATCGACTAAGTACTCGACCTTTTCCCAGTCTTGTTGAGAAGAAATGGTTGACTTTTCAGTTGATTGTAGCTGTGAAACAGAGCCACGAGAAAGGAGTATGTCATGGTGATATTAAGTGTGAGAATGTTCTAATTACATCCGGGAATTGGCTTTTCCTCGCTGATTTTGCTTCTTTCAAGCCCACCTACATTCCATATGACGACCCTtcagatttttcctttttctttgacaCTGGTGGAAGAAGGCTTTGTTATCTTGCTCCTGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGCGCAAGATGCCACTTCAAAACCATCTATGGATATATTTTCTGTTGGGTGTGTAATTGCAGAACTTTTCCTTGAGGGACAGCCACTATTTGAACTTTCTCAACTTCTTGCTTTTCGCAGAGGGCAATATGATCCTAGCCAACATCTTGAGAAAATACCAGATCCTGGAATCCGTAAGATGATACTCCACATGATTCAATTAGACCCAGATTCACGATTTTCTGCTGAAAGCTATCTAAAGGAATATGCAGTAGTTGTCTTCCCAACATATTTTTACCCGTTTCTACATAATTTTTACCGCTGCTGGAGGCCCCTCCATTCTGATATGAGGGTTTTATTATGCCAAAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAATAAGTCACCTGACCTGACAGGTGTTGCTTCCAGTGAACTTCTGGAAGAGATGGTAGCTaagaaaaatgtcaattttttgAAGGATTCATTGAAAAAGGGAGAGGAGATAGGAAAAAGTTTAGTTCATGATCATTATGAACTTCTTGGTGGTATCAGTAGTCTTTTAGGGGatgctaaaagaaataaccATTCATCTGGTTCCCATCATGTAACAGGAAATGTATCCAATTCTACCTTTcctcaaaacataaaaaatttacaatctcCTGGTGAGCTGCTTCAAACTATTTCCAATGCCTTTCGAGGAAATGATCACCcttttctgaaaaatatttcaatgaatgatttgaattcattaaTGTCTGAGTACGACAGTCAATCAGACACATTTGGCATGCCTTTTTTGCCTTTACCCAAGGATAGTATAAGATGTGAAGGTATGGTTCTGATTACTTCTTTGCTCTGCTCCTGCATACGCAATGTAAAGTTGCCTCGTCTGAGGAGGGCAGCTATACTATTGTTGAAGGCTTCAGCATTATatattgatgatgaagatCGCTTGCAGCGTGTTATCCCATATATTATCGCAATGCTTTCAGATCCAGCAGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCTTAATCCGTGATTTTCCTCCTAGTGATGCAAAGATATTTCCTGAGTACATACTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGTTATGCCAGCAATATAGCTAAGCTAGCCTTAACTGCCTATGTTATCTTGATACGGTCAATGAGCTTGAGTGAGGCAGGTGTTCTTAATGAACTGGGTTCAACACAGAAGTTATCAATATCATCTAGTCAAACCCCTGGAAGATTGCAGAGGATGAATAGAGATGTGCAACTTGGGCAGCTGAGGAAATCCATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCCAAGCAAACACCAAATATCAGAAGGGCACTCCTTCAGGACATTGGTAAATTATGCTATTTCTTTGGTCAAAGACAGAGTAATGACTTTCTCTTACCAATCCTTCCTGCCTTCCTAAATGACCGGGAGGAGCAATTAAGGGCtgtattttatgaaaagattGTGTATGTCTGCTTCTTTGTGGGCCGAAGAAGTGTAGAAGAATATCTTTTGCCTTACATTGAGCAGGCTTTAAGTGATACAACAGAAGGTGTAATTGTTAGAGCCTTGGATTGTTTGGCCGTTCTATGCAAAAGTGGTTTCTTTCGGAAGAGGATACTGCTTGAAATGATAGAGCGTGCCTTTCTGTTACTGTGTTATCCTGGGGAATGGGTAAGAAGATCAGCTGTCACTTTCATTGCTGCTAGCAGTGAGAGCTTGGGTGAAGTCGATTCTTATGTTTTCCTTGCTCCTGTTATACGGCCTTTCCTCCATAGACAACCTGTCTCCCTGGCTTCTGAGGAGactctttcttcttgtttaaaACCTCCTGTCTCAAGACAGGTTTTCTTTGAAGTCTTGGAGAACTCAAGGAGTTCAGACATGTTagaaagacaaagaaagataTGGTACAGTTCATCACCACAATCTAAACTGTGGGAAATGGATTTACTGAAGAAAGGAATTGATGAGTTGGACTCATTGGAGAGCTGGCCCGACAAGCAACAAGGTCCTGAGGGGCTACAATATGTTGGCACTGGTTTACAACAACCTGGGATTAATGATTGTGACAAAGCTGAAGCAAAATTGAGGGATATGGGAGCCTTTGTATATAATGAATGCAGTATGATGGGACATCAGAAGTTACAGTTATCGGGTTTCATGTCACCACAGGTTAATGGAGTAAATAGTTTGGCATATGAAAAGCCATCTGATGGCATACCTTTGTACTCTTTCAGTGTCGGCAGAAGGGCAGTGGGAATTCCTCCTGCAGCATCTGATTCCCCACTACAAATGAATTCTCTGGGAATCAGTTCATCTTCTATGCCTTGGGTCAATCCAGTTAGCGAGTCCTTTAATTTAGCTAGTTCAGTTCCAGCACCAAATCTTGTTTCAGGTTCTTTTAGTGTTAACAATGGTTCTATTCAGTTCTATCCAGTGGTACATGAACCAGATGGCAGGGAAAATGACTCAGCTTATAGTAATAGCAAATTTGTGGATGTGGGGCCATCAGCTAATACAAAAGGTGGTTCAATTGCAGTGGAAGAGGCATCCACCCAAACTGATTTATCAGTAGTTCCATCTTTTGCTCGAACATCCATCCCTGATACAGGTTGGAGGCCCCGGGGTGTGTTAGTTGCACATCTGCAGGAGCACCGTTCTGCTGTGAATGACATAGCTATTTGTACTGATCATAGCTTCTTTGTGAGTGCATCTGATGACTCTACAATTAAAATATGGGATTTCAGAAAGCTAGGAAAGGACATTTCATTCAGGTCAAGGCTAACTTATCACCTAGAGGGAAGCCGGGCACTCTGTGCAGCAATGCTCCGAGGTTCTGCGCAAGTAATTGTTGGAGCATGTGATGGATTTATCCATATGTTTTCTGTTGATCATATTTCTAGAGGTCTAGGAAATGTTGTTGAGGAGTATTCTGGAGTTACTGATCTCATAAAGAAGGATGTCAAGGAAGGTGCCATACTCAGCCTTCTAAATTACCCTATGGATAATTATACCATCATGTATAGCACCCAGAATTGTGGCATTCATCTGTGGGATACTAGGTCAAGTTCAAATGCATGGACTCTTAATGCTACTCCTGAAGAGGGCTATGTCTCTTCTCTGGTTTCAGGGCCTTGCGGTAATTGGTTTGTATCAGGATCATCCAGGGGCGTGCTTACTCTTTGGGATCTGAGGTTTCTTATACCTGTGAACTCTTGGCAGTATTCTCTTTCTTGCCCCATAGAAAAAATGTGTCTTTTTATTCCTCCTCCTAATGTTTCTTTATCTTCAACCGCAAGGCCCCTTGTTTATGTAGCAGCAGGCTGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGGGAGCTGCCACCAGGTACTGAGGGTGGTAAATTATGACAGCGATGCAGAAATGTCTGATCTTCCTTGGGCATTGGCCAGACCGTTGAGCAAGGCAACTTCTAAACTGGATCTGAGGCGAAATGTGAATCCAAAGTATAGAGTTGATGAGCTAAATGAACCTCCTCCCCGTCTTCCTGGTGTCCGATCATTACTTCCTTTGCCTGGAGGTGATTTGTTGACAGGGGGTACTGATTTGAAGATACGCCATTGGGATCACAACAGTCCGGACAGGAGTTACTCTGTATGTGGGCCAAACTTAAAAGGAGTAGgaaatgatgatttttatgaaataaagtCTAGTTCGGGGGTGCAAGTTGTACAgGAGACAAGAAGACATCCTCTTACGAACAAACTGACAGCAAAGGCAGTTCTTGCAGCTGCTGCCACTGATTCTGTCGGTTGCCACCGTGATTCTGTCTTATCTCTTGCTTCTGTCAAGTTATACCAGAGACTCCTACTATCAAGCAGTAGAGATGGGACCATCAAGATGACAGTGACGAATGAGGAAAATCCTCCATA 4619 0.4107 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLKEYERRLSQIRDIFRGIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFPSLVEKKWLTFQLIVAVKQSHEKGVCHGDIKCENVLITSGNWLFLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDATSKPSMDIFSVGCVIAELFLEGQPLFELSQLLAFRRGQYDPSQHLEKIPDPGIRKMILHMIQLDPDSRFSAESYLKEYAVVVFPTYFYPFLHNFYRCWRPLHSDMRVLLCQSAFQEILKQMMNNKSPDLTGVASSELLEEMVAKKNVNFLKDSLKKGEEIGKSLVHDHYELLGGISSLLGDAKRNNHSSGSHHVTGNVSNSTFPQNIKNLQSPGELLQTISNAFRGNDHPFLKNISMNDLNSLMSEYDSQSDTFGMPFLPLPKDSIRCEGMVLITSLLCSCIRNVKLPRLRRAAILLLKASALYIDDEDRLQRVIPYIIAMLSDPAAIVRCAALETLCDILPLIRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYVILIRSMSLSEAGVLNELGSTQKLSISSSQTPGRLQRMNRDVQLGQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRQSNDFLLPILPAFLNDREEQLRAVFYEKIVYVCFFVGRRSVEEYLLPYIEQALSDTTEGVIVRALDCLAVLCKSGFFRKRILLEMIERAFLLLCYPGEWVRRSAVTFIAASSESLGEVDSYVFLAPVIRPFLHRQPVSLASEETLSSCLKPPVSRQVFFEVLENSRSSDMLERQRKIWYSSSPQSKLWEMDLLKKGIDELDSLESWPDKQQGPEGLQYVGTGLQQPGINDCDKAEAKLRDMGAFVYNECSMMGHQKLQLSGFMSPQVNGVNSLAYEKPSDGIPLYSFSVGRRAVGIPPAASDSPLQMNSLGISSSSMPWVNPVSESFNLASSVPAPNLVSGSFSVNNGSIQFYPVVHEPDGRENDSAYSNSKFVDVGPSANTKGGSIAVEEASTQTDLSVVPSFARTSIPDTGWRPRGVLVAHLQEHRSAVNDIAICTDHSFFVSASDDSTIKIWDFRKLGKDISFRSRLTYHLEGSRALCAAMLRGSAQVIVGACDGFIHMFSVDHISRGLGNVVEEYSGVTDLIKKDVKEGAILSLLNYPMDNYTIMYSTQNCGIHLWDTRSSSNAWTLNATPEEGYVSSLVSGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQYSLSCPIEKMCLFIPPPNVSLSSTARPLVYVAAGCNEVSLWNAENGSCHQVLRVVNYDSDAEMSDLPWALARPLSKATSKLDLRRNVNPKYRVDELNEPPPRLPGVRSLLPLPGGDLLTGGTDLKIRHWDHNSPDRSYSVCGPNLKGVGNDDFYEIKSSSGVQVVQETRRHPLTNKLTAKAVLAAAATDSVGCHRDSVLSLASVKLYQRLLLSSSRDGTIKMTVTNEENPP 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00534 1539 MobiDBLite consensus disorder prediction 401 421 - -
Bva03g00534 1539 CDD STKc_Vps15 16 303 - -
Bva03g00534 1539 Gene3D - 619 842 IPR011989 -
Bva03g00534 1539 ProSiteProfiles HEAT repeat profile. 698 736 IPR021133 -
Bva03g00534 1539 ProSiteProfiles HEAT repeat profile. 530 562 IPR021133 -
Bva03g00534 1539 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1530 IPR045162 GO:0004674|GO:0016236|GO:0045324
Bva03g00534 1539 SUPERFAMILY WD40 repeat-like 1113 1530 IPR036322 GO:0005515
Bva03g00534 1539 Gene3D - 1098 1156 IPR015943 GO:0005515
Bva03g00534 1539 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00534 1539 Pfam WD domain, G-beta repeat 1112 1148 IPR001680 GO:0005515
Bva03g00534 1539 Gene3D - 1157 1318 IPR015943 GO:0005515
Bva03g00534 1539 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00534 1539 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1116 1150 - -
Bva03g00534 1539 Gene3D - 476 615 IPR011989 -
Bva03g00534 1539 Gene3D Transferase(Phosphotransferase) domain 1 22 359 - -
Bva03g00534 1539 SMART WD40_4 1492 1532 IPR001680 GO:0005515
Bva03g00534 1539 SMART WD40_4 1109 1148 IPR001680 GO:0005515
Bva03g00534 1539 SMART WD40_4 1404 1438 IPR001680 GO:0005515
Bva03g00534 1539 SMART WD40_4 1256 1297 IPR001680 GO:0005515
Bva03g00534 1539 SMART WD40_4 1159 1196 IPR001680 GO:0005515
Bva03g00534 1539 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00534 1539 SUPERFAMILY Protein kinase-like (PK-like) 26 325 IPR011009 -
Bva03g00534 1539 Gene3D - 1319 1535 IPR015943 GO:0005515
Bva03g00534 1539 ProSiteProfiles Trp-Asp (WD) repeats profile. 1116 1150 IPR001680 GO:0005515
Bva03g00534 1539 SUPERFAMILY ARM repeat 424 826 IPR016024 -
Bva03g00534 1539 Pfam HEAT repeat 530 558 IPR000357 GO:0005515
Bva03g00534 1539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00534 Bva-Chr3 3092782 3100496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00534 31 242 AGC Kinase Gene Family AT3G08730 26.126 4.18e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Bva03g00534 Pkinase 2.5e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00534 03 3092782 3100496 Bva03g00534 03 3092782 3100496 ECH