Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00530 atgaagaCCAAGACGCCATTAAAGCAACTGAAGCTCGCAGTTCCTGCTCAAGAAACCCCCATTTCCTCTTTCCTGACTGCAAGTGGTACATTTCACGATGGAGATCTGCTCTTGAACCACAAAGGATTGCGGCTCATTTccgaagaaaaagaatcacGCCCTTCTGATGTCAAGgagtttgattttgatttctcaCTGGAAGATCTCGAGACCATCAAAGTGATTGGAAAAGGCAGCGGTGGTGTAGTACAACTTGTTCGCCATAAGTGggttggaaaattatttgctttgaAGGTCATACAGATGAACATACAAGAGGAGATCAGAAAACAGATTGTGCAGGAGCTGAAAATAAACCAAGCATCACAGTGCCCACATGTTGTAGTTTGCTACCACTCGTTCTATCATAATGGAGTTATATCGCTTGTGTTAGAATACATGGATCGTGGTTCTCTGGCAGATGTGATTAGACAGGTTAAAACAATTCTGGAACCATATCTTGCTGTTGTTTGTAAACAGGTCTTGCAAGGTCTGGTTTACTTGCATCATGAAAGACATGTAATACATAGAGACATCAAACCATCTAACTTACTGGTAAATCACAAAGGGGAAGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAAGTTCAATGGGCCAGAGAGATACATTTGTTGGAACTTACAACTACATGTCGCCAGAAAGGATCAGTGGAAGTACTTATGATTTCAGCAGTGACATCTGGAGTTTGGGCATGGTAGTGCTTGAGTGTGCCATAGGACGGTTTCCTTATATACAATCAGAAGATCAGCAAAGTTGGCCTAGCTTTTATGAGCTTTTGGAAGCAATTGTGGAAAGCCCACCACCTTCTGCTCCATCAGATCAGTTCTCTCCTGAGTTCTGTTCATTCGTGTCATCCTGCATACAAAAGAATCCTCGGGATAGACTGCCATCCTTGGAGCTTCTGGAACATCCTTTCATAAAAAAGTTTGAAGACAAAGACCTAGATCTTGAGACCCTCGTAGGTAGCTTGGAGCCTCCTGTAAATTTTCTCAGATA 1064 0.4023 MKTKTPLKQLKLAVPAQETPISSFLTASGTFHDGDLLLNHKGLRLISEEKESRPSDVKEFDFDFSLEDLETIKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEEIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDFSSDIWSLGMVVLECAIGRFPYIQSEDQQSWPSFYELLEAIVESPPPSAPSDQFSPEFCSFVSSCIQKNPRDRLPSLELLEHPFIKKFEDKDLDLETLVGSLEPPVNFLR 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00530 354 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 352 - -
Bva03g00530 354 Gene3D Transferase(Phosphotransferase) domain 1 150 347 - -
Bva03g00530 354 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Bva03g00530 354 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Bva03g00530 354 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 352 - -
Bva03g00530 354 Pfam Protein kinase domain 70 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00530 354 SMART serkin_6 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00530 354 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00530 354 CDD PKc_MAPKK_plant_like 67 333 - -
Bva03g00530 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Bva03g00530 354 SUPERFAMILY Protein kinase-like (PK-like) 67 346 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00530 Bva-Chr3 3073178 3076507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00530 1 354 MAP Kinase Kinase Gene Family AT5G56580 85.915 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bva03g00530 Pkinase 9.2e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00530 03 3073178 3076507 Bva03g00530 03 3073178 3076507 ECH