Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00528 ATGTCGTGGCAAACCTACGTAGATGAGCATCTTATGTGCGATATCGATGGAAATCATCTCACTGCTGCGGCTATCATCGGCCAAGAGGGCAGCGTTTGGGCGCAGAGTTCCAACTTCCCTCAGTTCAAGCCCGAAGAAATAACTGCAATTGTGAATGATTTGGCTGAGCCTGGATCACTTGCTCCAACTGGATTATATCTTGGTGGCACAAAATATATGGTGATCCAAGGTGAGCCTGGAGCAGTCATTCGAGGAAAGAAGGGACCTGGTGGTGTTACTGTCAAGAAGACCAATCAGGCTTTAATCATTGGAGTTTACGATGAGCCAATGACTGCGGGTCAGTGCAACATGATAGTTGAAAGGCTTGGTGATTATCTCATTGATCAGGGTATCTA 395 0.4658 MSWQTYVDEHLMCDIDGNHLTAAAIIGQEGSVWAQSSNFPQFKPEEITAIVNDLAEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGVYDEPMTAGQCNMIVERLGDYLIDQV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00528 130 PRINTS Profilin signature 113 130 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Bva03g00528 130 PANTHER PROFILIN 1 129 IPR005455 GO:0003779
Bva03g00528 130 SUPERFAMILY Profilin (actin-binding protein) 2 129 IPR036140 -
Bva03g00528 130 CDD PROF 2 129 IPR005455 GO:0003779
Bva03g00528 130 PANTHER PROFILIN 1 129 - -
Bva03g00528 130 Gene3D Dynein light chain 2a, cytoplasmic 2 130 - -
Bva03g00528 130 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Plant profilin signature 117 130 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bva03g00528 130 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Bva03g00528 130 Pfam Profilin 1 129 IPR005455 GO:0003779
Bva03g00528 130 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bva03g00528 130 SMART prof_2 1 130 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00528 Bva-Chr3 3065620 3067883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00528 1 128 Cytoskeleton Gene Families AT2G19760 78.125 5.20e-77 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00528 K05759 - tcc:18588488 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00528 03 3065620 3067883 Bva08g02185 08 14339234 14340024 ECH
Bva03g00528 03 3065620 3067883 Bva02g02348 02 23029201 23030829 ECH
Bva03g00528 03 3065620 3067883 Bva10g00153 10 3057153 3058992 ECH
Bva03g00528 03 3065620 3067883 Bva06g02577 06 16282464 16283505 ECH
Bva03g00528 03 3065620 3067883 Bva03g00528 03 3065620 3067883 ECH