Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00504 ATGCCAATAGAATTCATCTTAATTCATCGACTGTCTATGTCTTTGTCTTTTCCTAATGGTCAAATATTGggtttaaaatttgacTACATCATACTCTTCCATAATCCCCTACTTGACATCTCGAGTTTAGAATCCAGCAGAGAAATGGAAAAAGCAGAAAAGCTGCCAAAATATGCGCCCAATCCAGTAATATTGCAGAGTGAAGATTTGCTTAAGTATATAATGGAGAGCAGCGTGTACCCGAGAGAGGCAGAGCCTCTTAGAGAGCTAAGGAACGCCACAACAAATCACCCTCTGGGCTTCATGGCCGTTTCTGGTGATGTGGGTCAGCTAATGGCGATGCTCTTGAAGTTGCTGAATGCAAAGAAGACAATTGAAGTGGGAGTGTTTACTGGATACTCGCTTCTCCTAACTGCCCTTAACATTCCCCCAGATGGAAAGATTACAGCCATGGATATTGATAGGAAATCTTATGAGATAGGGCTACCCTTCATCAAAAAGGCTGGCGTAGAGCACAAGATTGACTTCATAGAGTCTCCAGCACTACCAATTCTAGATAAGCTTTTACAAGATCCTGCAAATGAAGGATCTTTTGACTTTTCCTTCGTTGACGCTGACAAAGATAACTATTGGAATTACCATGAGAAGCTTCTGAGACTGGTCAAGATTGGTGGGCTACTTGTCTACGATAACACACTGTGGGGTGGAACTGTTGCCTTGCCTGAAGAAGCTGTTCCAGAGAACAAAAGACAATGGAGGCAATCCTCAATTGCTTTCAACAAAGCAATTTCAGATGATTCTCGCGTTGAAATCGCTTTCGCTTCAATAGGAGATGGGCTTACTATCTGCAGGCGCGTTGCTTG 863 0.4229 MPIEFILIHRLSMSLSFPNGQILGLKFDYIILFHNPLLDISSLESSREMEKAEKLPKYAPNPVILQSEDLLKYIMESSVYPREAEPLRELRNATTNHPLGFMAVSGDVGQLMAMLLKLLNAKKTIEVGVFTGYSLLLTALNIPPDGKITAMDIDRKSYEIGLPFIKKAGVEHKIDFIESPALPILDKLLQDPANEGSFDFSFVDADKDNYWNYHEKLLRLVKIGGLLVYDNTLWGGTVALPEEAVPENKRQWRQSSIAFNKAISDDSRVEIAFASIGDGLTICRRVA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00504 287 Gene3D Vaccinia Virus protein VP39 30 287 IPR029063 -
Bva03g00504 287 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 59 286 - -
Bva03g00504 287 PANTHER O-METHYLTRANSFERASE-RELATED 59 286 - -
Bva03g00504 287 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 63 286 IPR002935 GO:0008171
Bva03g00504 287 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 285 IPR029063 -
Bva03g00504 287 CDD AdoMet_MTases 125 229 - -
Bva03g00504 287 Pfam O-methyltransferase 76 286 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00504 Bva-Chr3 2916941 2919398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00504 64 286 Monolignol Biosynthesis Gene Families AT4G26220 65.471 7.71e-110 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00504 K00588 - gmx:100795229 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00504 03 2916941 2919398 Bva03g00504 03 2916941 2919398 ECH