Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00495 ATGTATAGAATAATATCCACGCCAGCCTCTAAATTCCGCCAACTCCGCGCCCAAGCCACCACCGACGAGGAACATGCCCACCACATTCTATGGCGTTACCAAATCCTCGACCCAGACAGCGACATTGTTGCAACATGGAACATGGTATTCCTCGTCACCAGTCTTCTTTCACTTTTCGTAGACCCTCTTTATTTCTACCTACCCCATATCGGAGGCCAGGCTTGCTTGGACACAGATGCCTCATTGAGCACTGCGGTCACTTGCCTTCGCACCGTGGGAGACCTTTTCTTCGTTCTCCACATGCTCATGAAGTTTCGGACCGCCTTTGTGTCCCCAAGCTCTAGAGTGTTTGGTCGCGGTGAGCTGGTTATGGATCCCCGAGAAATTGCCGTTCACTATTTGAAGTCAGATTTTGTCATCGATCTCGCTGCAACGCTTCCACTGCCGCAGATGATCATTTGGTTAGTAATTCCAGCAACAGGGGACTCACGAGCTGATCATGCCAACAACACTCTTGctctttttgttcttattcaGTATGTTCCTAGACTATTTCTTATCTTCCCTTTGAACCGGCGTCTTATTAAATCCTCGGACGTTCTCACCAAGACTCCCTGGACAGGAGCTGTATACAATCTGATGCTCTACTTGCTAGCTAGTCATGTTACAGGAGCTACATGGTATCTGTCCTCAATAGGGCGACAATATACCTGCTGGAAATCTCAGTGCAAAAGGGAAAATTCAAATGCCGTTGCTTgccttccttcttttcttaattgtaATAGTTTGACTTCACCTGATAGGATGTACTGGTTAAATATCACCCAAGTTGTTGCCAATTGTGATGTAAAGGACGAGAACGTCAAATATAAGTTTGGGATTTTTGCCGATGCTTTTAGTAATTCCGTAGCTTCTTCCAAATTTAAGGAGAGATACTTCTATTGTCTATGGTGGGGTCTAAGAAATTTAAGTTCATATGGACAGACTTTGGACACCACCACCTACCTTGGGGAGACACTTTTTTGCATTGTTCTATGCATCGTTGGATTAGTTCTCTTTTCACTACTGATTGGCAACATGCAGgcatatatttcttcaatgtCCCCTTCTTCTCACAAATGGACGATCAGCTTCTTGATGCCATTTGTGAACGCCTTAGCTCATCATTGAATACAGAGGGAACCTACATTTTTCGGGAGGGTGATCCAGTAGATGAAATGGTGTTTATCATTAGAGGGCAACTGGAGAGCTCTACAACCGACGGAGGAAGGTCAGGATTCTTCAACTCCATCACCCTCAGACCCGGTGACTTCTGTGGGGAAGAATTATTGACATGGGCCTTAATGATTAAATCTAATGTAATCTTGCCTTCTTCTACTCGGACTGTTAGAGCCCTTACAGAAGTCGAAGCTTTTGCCCTACAGGCAGAGGATCTGAAAATTGTTGCAGGTCAATTTAAACGTCTTCACAGTATGCAATTTCAGCATGCTTTCAGGTATTATTCCCATCAGTGGAGGACATGGGGTGCTTGCCTCTTACAAGCTGCTTGGAGAAAGCATCTAAGAAGGAAGGCCTCAAGGGAGTTATCCACGAGAAAAGGATTATACTACATGGCGCCTGAGGGCGGGCTCAGTTACAGTGACCTGCAACCAAGCTATGAAGATGGGATCGAGAGCTCATCTATGGATAATTCAAGTAGTTTTCAAAATCTTAGTACTACTGTTTTAGCCTCTAGGTTTGCTGCAAATACTAAGCGGGGTGCTGGCAGTGCCAGTAAAGTGCGAGGCAGGGATCCTGTTCCCCAGTTATTCAAACCAGCCGAACCCGATTTCTTTCAAGACCATGGggaagtttaattaattagcacaagaACCAATCACTGGCGGGAAAGGTTAGTTAGGAAAATCTTATCACTCGGATGTAAATGCATGTTGATAGGTTAGTAATGATATGATTACATTCTTGAACTTGCACATATTGTATAACGACAAATGTTGGATTGTACTAACACCACACCATAGGAAATGTAATGCAATGCCTACATGgtatacatattttttctttttggtaaattgTTGTAACATACAGCATGTGCTTACGTAAATTAG 2108 0.4227 MYRIISTPASKFRQLRAQATTDEEHAHHILWRYQILDPDSDIVATWNMVFLVTSLLSLFVDPLYFYLPHIGGQACLDTDASLSTAVTCLRTVGDLFFVLHMLMKFRTAFVSPSSRVFGRGELVMDPREIAVHYLKSDFVIDLAATLPLPQMIIWLVIPATGDSRADHANNTLALFVLIQYVPRLFLIFPLNRRLIKSSDVLTKTPWTGAVYNLMLYLLASHVTGATWYLSSIGRQYTCWKSQCKRENSNAVACLPSFLNCNSLTSPDRMYWLNITQVVANCDVKDENVKYKFGIFADAFSNSVASSKFKERYFYCLWWGLRNLSSYGQTLDTTTYLGETLFCIVLCIVGLVLFSLLIGNMQAYISSMSIRIEEWRIKKRDTEEWMRRRQLPPELQNRVRRFVQYKWIATRGVDEESILRSLPEDLRREIQRHLCLSLVRRVPFFSQMDDQLLDAICERLSSSLNTEGTYIFREGDPVDEMVFIIRGQLESSTTDGGRSGFFNSITLRPGDFCGEELLTWALMIKSNVILPSSTRTVRALTEVEAFALQAEDLKIVAGQFKRLHSMQFQHAFRYYSHQWRTWGACLLQAAWRKHLRRKASRELSTRKGLYYMAPEGGLSYSDLQPSYEDGIESSSMDNSSSFQNLSTTVLASRFAANTKRGAGSASKVRGRDPVPQLFKPAEPDFFQDHGEV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00495 691 SMART cnmp_10 443 574 IPR000595 -
Bva03g00495 691 ProSiteProfiles cAMP/cGMP binding motif profile. 443 573 IPR000595 -
Bva03g00495 691 SUPERFAMILY cAMP-binding domain-like 373 563 IPR018490 -
Bva03g00495 691 Pfam Cyclic nucleotide-binding domain 466 553 IPR000595 -
Bva03g00495 691 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 23 686 - -
Bva03g00495 691 CDD CAP_ED 443 574 IPR000595 -
Bva03g00495 691 Pfam Ion transport protein 45 367 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva03g00495 691 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 23 686 - -
Bva03g00495 691 SUPERFAMILY Voltage-gated potassium channels 37 365 - -
Bva03g00495 691 MobiDBLite consensus disorder prediction 658 691 - -
Bva03g00495 691 Gene3D Jelly Rolls 441 561 IPR014710 -
Bva03g00495 691 Gene3D Helix hairpin bin 371 434 - -
Bva03g00495 691 Gene3D - 47 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00495 Bva-Chr3 2868651 2873617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00495 29 691 Ion Channels AT5G14870 65.879 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00495 K05391 - gmx:100802812 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00495 03 2868651 2873617 Bva03g00495 03 2868651 2873617 ECH