Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00490 ATGGAGAGAAATCCCATGTGGGCATGCTTCATTTCATTCCTTCTTCTCCTTAACATGGCTAATTGTGTGGAGGAAGAGGTGAAGACCACATTGATTAGTTTTCTTGAAAAGCTTTCTAGTAGCAATGGCCAACAGAACAATACTACGTTTTGGACCCAAGACACAGATCCCTGCAAGGACAGTTGGGAAGGTGTTGTGTGTGATCCTTCAAAGGAACATGTAAGGAGTTTACTTCTTGACAGGCACAATTTTTCTGGAACTCTTGATGCTGCCATGCTGTGCAAATTGCAGCCACTATCTGATTATCTCACAGTTCTTAGCGTTGATGGAAACAACATCAGTGGAGGAATAGCATTTGAGGTTGGAAACTGCACACATCTCACTCATTTGATAGTAAGTGGAAACCAACTTTCTGGAGGTCTTCCTAGTTCTCTTGCCATGTTAAACAATTTGAAAAGACTTGATATTTCGAATAATAACTTTTCGGGTGAGTTGCCAAACCTGTCAAGAATCTCAGGGCTCAATGTCTTCTTTGCTCAAAACAATCATCTTAGTGGACAGATACCCAGATTCGATTTTTCCAATCTTGCCCGCTTCAATGTGTCCTTTAACAATTTCAGTGGACCCATTCCCTATGTGGGTGGCCATTTCTTTGCGGACAGCTTCATTGGTAATCCTGAACTGTGTGGAAATCCCTTACCCAAAAATTGCTCTTCTCTGGCTCTTGATGAGAAAACAGAAGAGACTGAGGAATCAAAGGATGGTCCTTCTAAGGACCAGATTCTTATGTATTCAGGCTATGCTGCATTGGGTTTGATTGTAGTCCTTTTCGTAATTTTCAAGttatgtaaaagaaagaagacagAAAAGAAGGTTGATTCAGTATGTGATTTAGAAGCAACTCATAATGTCACTGACAAGTCTAGTATTGTTTCAAGTGAATACAAAGGAGGTTTAAGCAAGTCTGAGCTTTCAGGCACCTCTGAAAGTGGACTTGCCTCACAATCACTTATTGTTGTTGCAAGACCAGTGGCAgatgatttgaaatttgaggACTTGCTGAGGGCCCCTGCTGAATTGCTTGGAAGAGGAAAGAATGGTAGTCTTTATAAGGTGGTGCTTGACAATGGGATGGTTGTGGTTGTAAAAAGACTTAAAGACTGGACAAGTTCCAGTCATGAATTCAAGCAGAGAATGGAAAGATTGAACCAAGTGAAGCACTCTATTGTACTGCCACATCTTGCTTTCTATACCTCCAAACAAGAGAAGCTTTTGGTCTATGAATATCAACACAATGGGAGCTTATTCAAGCTTCTGCACGGTACTCCAAAATCAAAAGCCTTTGACTGGACCAAGAGGCTTGGACTTGCGGCTGCAGTTGCTGATGCATTAGCCTACATGCATCAAGAACTTGGTGAAGATGGTATTGCACATGGTAACTTGAAGTCTTCTAACATTTTGCTGAACATCAATATGGAGCCATGCATAAGTGAGTATGGAATCACGGCCATTGACGATCAAAACAGCTCATCCTTTGCTGGTTCTGTGGATGCTGGTGCACCAGATGCCTTCAAGACAGATGTTTATGCCTTTGGAGTGATACTTCTTGAACTGCTTACAGGAAAGTTAGTAAAGAGCGATGGCGTAGACTTAACTGATTGGGTTCAGTCAGTTGTAAGGGAAGAATGGACAGGTGAAGTGTTTGACAGGTTCCTAATATCAGAATATGCAAGTGAAGAGAGGATGGTGAATTTGCTTCAGGTTGCTATAAAATGCATCAATCGTTCTGCAGAGGCTAGGCCAAGTATGAACCAAGTTTCTCTCGTGATTAACTCtataaaagaggaagaagaaaaatcacttATTTATGAAGCATG 1877 0.4022 MERNPMWACFISFLLLLNMANCVEEEVKTTLISFLEKLSSSNGQQNNTTFWTQDTDPCKDSWEGVVCDPSKEHVRSLLLDRHNFSGTLDAAMLCKLQPLSDYLTVLSVDGNNISGGIAFEVGNCTHLTHLIVSGNQLSGGLPSSLAMLNNLKRLDISNNNFSGELPNLSRISGLNVFFAQNNHLSGQIPRFDFSNLARFNVSFNNFSGPIPYVGGHFFADSFIGNPELCGNPLPKNCSSLALDEKTEETEESKDGPSKDQILMYSGYAALGLIVVLFVIFKLCKRKKTEKKVDSVCDLEATHNVTDKSSIVSSEYKGGLSKSELSGTSESGLASQSLIVVARPVADDLKFEDLLRAPAELLGRGKNGSLYKVVLDNGMVVVVKRLKDWTSSSHEFKQRMERLNQVKHSIVLPHLAFYTSKQEKLLVYEYQHNGSLFKLLHGTPKSKAFDWTKRLGLAAAVADALAYMHQELGEDGIAHGNLKSSNILLNINMEPCISEYGITAIDDQNSSSFAGSVDAGAPDAFKTDVYAFGVILLELLTGKLVKSDGVDLTDWVQSVVREEWTGEVFDRFLISEYASEERMVNLLQVAIKCINRSAEARPSMNQVSLVINSIKEEEEKSLIYEA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00490 625 Gene3D Phosphorylase Kinase; domain 1 335 429 - -
Bva03g00490 625 ProSiteProfiles Protein kinase domain profile. 355 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00490 625 Gene3D Ribonuclease Inhibitor 20 99 IPR032675 -
Bva03g00490 625 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
Bva03g00490 625 PANTHER OS05G0588300 PROTEIN 6 624 - -
Bva03g00490 625 Pfam Leucine Rich repeat 123 139 IPR001611 GO:0005515
Bva03g00490 625 Pfam Protein kinase domain 359 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00490 625 SUPERFAMILY L domain-like 46 213 - -
Bva03g00490 625 Gene3D Ribonuclease Inhibitor 100 168 IPR032675 -
Bva03g00490 625 Gene3D Ribonuclease Inhibitor 169 240 IPR032675 -
Bva03g00490 625 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Bva03g00490 625 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Bva03g00490 625 Gene3D Transferase(Phosphotransferase) domain 1 431 624 - -
Bva03g00490 625 PANTHER OS10G0387400 PROTEIN 6 624 - -
Bva03g00490 625 SUPERFAMILY Protein kinase-like (PK-like) 359 606 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00490 Bva-Chr3 2842726 2844691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00490 8 614 Receptor kinase-like Gene Family AT3G08680 34.165 3.90e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva03g00490 Pkinase 4.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00490 - - gmx:100813796 820.076