Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00470 ATGAAGGAGAGTAACAAGAGTGAGAGTCGGGGTGGTGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGACGAGCAGCTTCAGAGGCATCTGAGCAGAGCATGGACTAtggagaagaacaagaagaaagaagaagatgagcCTGAAGGGAGGCCTACTCGAACCAGGCAAGAATGGGAGATAGACACCTCAAAGCTCGTCATCAAGAGCGTCATTGCTCGTGGTACTTTTGGCACCGTTCACCGTGGCATTTATGATGGCCAAGATGTTGCAGTTAAACTCCTTGACTGGGGAGAAGAGGGCCACCGGTCAGATGCTGAAATAGCTTCTCTGAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAACTTTATTGGGGCGACAATGGGGTCATCAGAGCTACACATACAGACGGAAAACGGTCAAATAGGCATGCCCATGGTTGTCCAATTGGCGCTTGATCTTGCAAGAGGGTTGAGCTATCTCCACTCCAAAAAAATTGTCCATAGAGATGTTAAAACGGAGAATATGCTTCTGGACAAGACAAGAACCTTGAAAATAGCTGATTTTGGAGTAGCTCGAATAGAGGCTTCCAATCCTCATGACATGACTGGTGAAACTGGAACACTAGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCATATAACAGAAAGTGTGACGTGTATAGCTTTGGTATTTGCTTATGGGAGATATACTGTTGTGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTGACCTCAGCTGTTGTTCGTCAGAATCTGAGACCAGAGATACCTCGTTGTTGCCCGAGCTCTCTTGCAAATGTAATGAAAAGATGTTGGGATGCTAATCCTGATAAGAGACCAGAGATGGACGAGGTGGTGAGCATGATAGAAGCCATTGACACTTCAAAGGGTGGAGGTATGATCCCTCATGATCAGCCTCAGGGTTGTTTATGTTTCCGGAGGTATCGAGGGCCTTG 1022 0.4511 MKESNKSESRGGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKKKEEDEPEGRPTRTRQEWEIDTSKLVIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTNFIGATMGSSELHIQTENGQIGMPMVVQLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMIEAIDTSKGGGMIPHDQPQGCLCFRRYRGP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00470 340 Pfam Protein tyrosine and serine/threonine kinase 69 310 IPR001245 GO:0004672|GO:0006468
Bva03g00470 340 ProSiteProfiles Protein kinase domain profile. 68 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00470 340 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 8 157 - -
Bva03g00470 340 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 156 334 - -
Bva03g00470 340 Gene3D Transferase(Phosphotransferase) domain 1 148 321 - -
Bva03g00470 340 SUPERFAMILY Protein kinase-like (PK-like) 51 310 IPR011009 -
Bva03g00470 340 SMART serkin_6 68 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00470 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Bva03g00470 340 PIRSF ILK 17 320 - -
Bva03g00470 340 Gene3D Phosphorylase Kinase; domain 1 56 147 - -
Bva03g00470 340 PRINTS Tyrosine kinase catalytic domain signature 172 190 IPR001245 GO:0004672|GO:0006468
Bva03g00470 340 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Bva03g00470 340 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Bva03g00470 340 CDD STKc_MAP3K-like 74 311 - -
Bva03g00470 340 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 157 - -
Bva03g00470 340 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 156 334 - -
Bva03g00470 340 MobiDBLite consensus disorder prediction 35 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00470 Bva-Chr3 2728820 2733276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00470 4 340 MAP Kinase Kinase Kinase AT3G22750 61.995 9.02e-172 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva03g00470 PK_Tyr_Ser-Thr 6.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00470 - - gmx:100796762 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00470 03 2728820 2733276 Bva03g00470 03 2728820 2733276 ECH
Bva03g00470 03 2728820 2733276 Bva04g00639 04 4282138 4286286 ECH