Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00463 ATGTATAGGAATAAGTGTGCGGCATGCTACAGACAATTCAACAGAATGGAGCACCTTGTAGAGCACATGAGGACCTCATTTCATTCGGGTCACGAACCAAGCTGTGGCATTTGCGGGAAACACTGCAGATCTTTCGAGTCCCTAAGGGAACATCTTATAgGTCCACTCCCAAAACAAGAATGCAGAGATGTTTTTGCCTACCAAGGTTGCAGGTTTTGCTTGAAAGTCTTTGATAGCCCTAACGCTCGCAGGGTCCACCAAGAAAGATGCCAACTCTCTGGACTAGATgcggGACTAATTGCTCGTTTTGCTAATTTGGGCTTACGCGATAACCTTAGTATGGGCAGAGGGCAACAAGTTGTTGCACTCGCTTGCAAAATGGTTGGTGGTGGCAGTGATGGCTCGCTAGATCTCTGTGCAAGGGTCTGCATCATTGATGAACAAGAAAACATCATCTTTCATTCTTATGTCAAGCCACCAATTCCAGTTACAAACTACAGGTATGAGACAACAGGTATTCGACCAGAGTACTTAAGGGATGCAATGCCTACGAGGGTAGTGCTGAGGAAGATCCAAGATTTTCTTTGCAATGGGGAGCCAATGTGGAAGATTCGCCCAAGAGCTGGTGGAAAAGCCAGGATTCTTGTCGGTCATGGTTTAGATCATGACCTCGAATCTTTGCAAATAGAGTACCGACCAGAAATGCTCagGGATACCGCAAAATACCCTCCATTAATGAAGACGAGCAAGCTCAGCAACTCGCTCAAGTACCTTACACAAGCATATCTCGGATATGATATTCAAACCGGAATACAGGACCCTTACGAAGACTGTGTTGCAACAATGAGGCTGTACATGAGAATGAGATCGCAAGCGCACAGAATAGAGGATTACCCTTTGGCTTCTGATCCACAAAACAGGAACAATTTTGTTTCGTGGAGGCAAAGTGATCTTGAGAGAATGACACCAGAACAAATGTTGGAAATCTCAAGGTCTGACTACTACTGCTGGTGCTTGGATTCATATATATA 1031 0.4452 MYRNKCAACYRQFNRMEHLVEHMRTSFHSGHEPSCGICGKHCRSFESLREHLIGPLPKQECRDVFAYQGCRFCLKVFDSPNARRVHQERCQLSGLDAGLIARFANLGLRDNLSMGRGQQVVALACKMVGGGSDGSLDLCARVCIIDEQENIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMPTRVVLRKIQDFLCNGEPMWKIRPRAGGKARILVGHGLDHDLESLQIEYRPEMLRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYEDCVATMRLYMRMRSQAHRIEDYPLASDPQNRNNFVSWRQSDLERMTPEQMLEISRSDYYCWCLDSYI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00463 343 PANTHER OS02G0709000 PROTEIN 2 341 - -
Bva03g00463 343 CDD REX4_like 121 285 IPR037431 GO:0006364|GO:0008408
Bva03g00463 343 Pfam Exonuclease 138 283 IPR013520 -
Bva03g00463 343 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Bva03g00463 343 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 2 341 - -
Bva03g00463 343 SUPERFAMILY beta-beta-alpha zinc fingers 5 52 IPR036236 -
Bva03g00463 343 Gene3D - 116 302 IPR036397 GO:0003676
Bva03g00463 343 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 33 IPR013087 -
Bva03g00463 343 SUPERFAMILY Ribonuclease H-like 133 289 IPR012337 -
Bva03g00463 343 SMART exoiiiendus 119 294 IPR013520 -
Bva03g00463 343 Gene3D Classic Zinc Finger 4 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00463 Bva-Chr3 2695466 2697252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00463 3 341 C2H2 Transcription Factor Family AT3G27970 75.219 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00463 - - gmx:100813973 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00463 03 2695466 2697252 Bva03g00463 03 2695466 2697252 ECH