Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00456 ATGCTTTCTCTGCAAATCACCGGTAGCAGAGCCTTTAATCGTCCATCGTCGTTGCTGAGCAGCAactcttcttcatttttggcGAGAGATGTGTGCTTGGTCAAAGCAGGCTCGGCAGTTACGGTTAGAGAGAAGCTTCGACTTAATGGCGGAACTGTTAGGGTTTTTGCAATGTCTAGCAATTCTTCTTCGCTTAAGATGAATCTGAACGAGTATTTGGTCACTCTAGAGCAACCATTCGGCATCCGATTCGCTCTCTTAGCTGACGGCAAAATCATCGTTCATTCCCTCAAAAAATGGGGTAATGCGGAGAAGTCGGGGATAATTATGGTGGGTGACACTTTGAAGAAAGCCGGTCATTCCGCAGAAAGCAGGCTTGTCGAGATTAAAGACTTTGGTGATACACAGAAGGTGATGAAGGAGAAAACAGGTCCCTTTAGCTTGGTTTTTGAGAGGCCCAAATATCCTTTCCCCATTCAGCTATTTCAGAATACGAATGATCTTGAAATATTGTTTAATAGAGGACGAGTTCCTATTGCCACTTGGAACAAGACATTGTTGGCGTCAAATTTACAGCCATCTAGTAAAAGCCCTGGGAATTCTGGGTTTTTGATTTTCAACACAAAGTTTCTTACATCAAAAGGGTGCAGGTTGATGAGCAATCAAAATGAACATGTCGTCTCACACCAGGAGAGAAACCTCTTTACTGAATCCATTGATCAACTTGCTTGTATCTTTACTGAAGAAGAGTGTGGAGATGGAGATTGGGCTCATGGAAGCTTCCCGCTCGAGGAATATATTCAGGCTCTGGAGCGTTCCAAGGATGAGCTGTACTATAATCACTCCCTTGGTATGCGCTATACTAAGCTTACGGAGCAAATATTTGTGGGGTCCTGTATACAAGTAGAAGCTGATGTGGAGACCTTGTCAAAAGTTGAGGGAGTCACTGCTGTTCTGAATTTCCAAGGTGTAACTGAAGCTGAGAATTGGGGaatcaatataaaatcaatcaatgaaGCTTGTCAAAGGAATAATATCCTCATGATCAACTATCATATACgGGAGGGAGATTCTTttgatttgagaaagaaaCTTCCATTTTGTGTGGGGCTTTTATTCCGATTGCTGAAGAAAAATCATCGCATCTATGTTTCTTGCACTTCGGGGTTTGATAGGTCTCCTGCTTGTGTGATTGCATACCTCCACTGGATCACAGACGTTTCCCTTCAGGGAGCTTATACTTGGGTTACAAAGAGGCACACTTGCAGACCTGACAGGCCAGCTATTGCATGGGCCACGTGGGATCTTATAGCAATGGTTGAAAATGGTAAACATGATGGACCGCCCACTCATGCTGTCACATTTGTGTGGTATGGGCTTGAGAACGAGGATGTAAATTTAGTTGGAGATTTTACTGGAAATTGGAAAGAGCCACTCAAGGCAACTTTCAAGGGTGGATTCAGATTTGAAGTGGAAGTTAAACTTCCACAAGGAAAGTACTACTACAAGTTCATTGTTAATGAGCAATGGAGACATTCCCCTAATTCGCCAGTAGAACGGGATGAGAGAGGGAATGTTAACAATGTGATAGTGATCGGTGATACGGCCAGCGTTAGACCTTTGGTCTTACCCCAGGAGAAAgaTGCAAACATTGTGAAGGTGATTGAGAGGCCTTTAAACGAAAAGGAGCGGTGTTTGCTGGCAAAAGCAGCGCGCTGTACTGCTTTCTCTGTGTGTCCTGTCAGACTAGCTCCTAAATA 1760 0.4256 MLSLQITGSRAFNRPSSLLSSNSSSFLARDVCLVKAGSAVTVREKLRLNGGTVRVFAMSSNSSSLKMNLNEYLVTLEQPFGIRFALLADGKIIVHSLKKWGNAEKSGIIMVGDTLKKAGHSAESRLVEIKDFGDTQKVMKEKTGPFSLVFERPKYPFPIQLFQNTNDLEILFNRGRVPIATWNKTLLASNLQPSSKSPGNSGFLIFNTKFLTSKGCRLMSNQNEHVVSHQERNLFTESIDQLACIFTEEECGDGDWAHGSFPLEEYIQALERSKDELYYNHSLGMRYTKLTEQIFVGSCIQVEADVETLSKVEGVTAVLNFQGVTEAENWGINIKSINEACQRNNILMINYHIREGDSFDLRKKLPFCVGLLFRLLKKNHRIYVSCTSGFDRSPACVIAYLHWITDVSLQGAYTWVTKRHTCRPDRPAIAWATWDLIAMVENGKHDGPPTHAVTFVWYGLENEDVNLVGDFTGNWKEPLKATFKGGFRFEVEVKLPQGKYYYKFIVNEQWRHSPNSPVERDERGNVNNVIVIGDTASVRPLVLPQEKDANIVKVIERPLNEKERCLLAKAARCTAFSVCPVRLAPK 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00456 586 Gene3D Immunoglobulins 440 536 IPR013783 -
Bva03g00456 586 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 25 586 - -
Bva03g00456 586 Pfam Glycogen recognition site of AMP-activated protein kinase 453 534 IPR032640 -
Bva03g00456 586 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 25 586 IPR030066 GO:0005983
Bva03g00456 586 Gene3D Protein tyrosine phosphatase superfamily 279 539 IPR029021 -
Bva03g00456 586 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 277 424 IPR029021 -
Bva03g00456 586 CDD E_set_AMPKbeta_like_N 453 532 - -
Bva03g00456 586 ProSiteProfiles Dual specificity protein phosphatase domain profile. 286 442 IPR020422 GO:0006470|GO:0008138
Bva03g00456 586 SUPERFAMILY E set domains 450 533 IPR014756 -
Bva03g00456 586 CDD DSP_laforin-like 285 431 IPR045204 GO:0019203|GO:0046838
Bva03g00456 586 Coils Coil 586 586 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00456 138 586 Protein tyrosine phosphatase (PTP) family AT3G01510 65.256 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00456 - - gmx:100814503 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00456 03 2657058 2661916 Bva03g00456 03 2657058 2661916 ECH