Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00444 ATGGACAAAAAACCGTGCAACACATCTCAAGATCCTGAAGTGAGAAAGGGGCCATGGACCCTGGAAGAAGACCTGATCTTGATCAACTATATCGCCAATCACGGCGAAGGTGTCTGGAATTCCTTAGCCAAAGCTGCTgGTCTTAAACGCACCGGCAAGAGTTGCCGGCTCCGGTGGCTTAACTATCTCCGACCCGACGTTAGGAGGGGGAATATTACACCAGAAGAACAGCTCTTGATCATGGAACTTCATGCAAAGTGGGGAAACAgGTGGTCAAAAATTGCAAAGCATCTACCAGGAAGGACTGACAACGAAATTAAGAACTACTGGAGGACTAGAATTCAAAAGCACACTAAGCAAGCTGAGAGCTTTCAGCAACAGAGTTCAGAGACAAATGATCATCAAGCAGCAAGCACGAGCCAAATGTCTGCCTTGGCTGCTCATCACGAGCCCATGGAGACCTACTCTCCACCCATTTTCCAGGGAACTTTGGAGCCATTTCCATCTCATCATCAGTTCCCCACTATCCCTGATCACTCAAGTTGCACCAGTGACAATAACCACACCAGCAACGACTGGAGCATGGAGGATATCTGGTCCATGCAATTACTTAATGGGGATta 623 0.4751 MDKKPCNTSQDPEVRKGPWTLEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHTKQAESFQQQSSETNDHQAASTSQMSALAAHHEPMETYSPPIFQGTLEPFPSHHQFPTIPDHSSCTSDNNHTSNDWSMEDIWSMQLLNGD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00444 207 MobiDBLite consensus disorder prediction 174 191 - -
Bva03g00444 207 SMART sant 15 65 IPR001005 -
Bva03g00444 207 SMART sant 68 116 IPR001005 -
Bva03g00444 207 Gene3D - 73 144 - -
Bva03g00444 207 Gene3D - 16 68 - -
Bva03g00444 207 MobiDBLite consensus disorder prediction 117 191 - -
Bva03g00444 207 MobiDBLite consensus disorder prediction 119 145 - -
Bva03g00444 207 CDD SANT 73 112 IPR001005 -
Bva03g00444 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bva03g00444 207 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 204 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bva03g00444 207 CDD SANT 18 63 IPR001005 -
Bva03g00444 207 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 204 - -
Bva03g00444 207 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Bva03g00444 207 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bva03g00444 207 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bva03g00444 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bva03g00444 207 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bva03g00444 207 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00444 Bva-Chr3 2596362 2599617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00444 4 207 MYB Transcription Factor Family AT3G01530 55.024 4.73e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g00444 Myb_DNA-binding 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00444 K09422 - gmx:778046 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00444 03 2596362 2599617 Bva03g00444 03 2596362 2599617 ECH