Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00440 ATGGCTTCAGCTGTTGGAAAGCATGGTGGTGATTCCATGGATGTTGATAAGCTTCCTGAAGGGATCAATGAAATGAAGATTAAGGATGAAAAGGACATTGACTCAGCAATGGTAGATGGGAATGGAACTGAAACTGGACACATTATTGTTACAACGATTGGTGGTAGAGATGGTCAACCCAAACAGACCATTAGTTACATGGCTGAGCGTGTGGTAGGACAAGGTTCATTTGGTATTGTGTTTCAGgcCAAGTGTCTAGAAACTGGAGAAACTGTTGCAATCAAGAAGGTTTTGCAGGATAAAAGATATAAGAACCGTGAATTGCAGACTATGCGCCTTCTCGATCATCCTAATGTTGTGTCACTCAAACATTGCTTCTTTTCTACAACCGACAAAGATGAACTCTATCTCAATTTGGTACTTGAGTATGTACCTGAGACTGTATATCGTGTGGTGAAACATTATAGCAAGGCAAATCAGCGGATGCCCCTGATATATGTTAAACTCTACACATACCAGATTTGTAGAGCTCTGGCTTATATTCATGGTTGTGTTAGAGTATGCCACAGGGACATTAAGCCGCAGAATCTACTGGTTAATCCCCACACTCATCAGGTCAAGCTTTGTGATTTTGGAAGTGCTAAAGTTCTGGTTAAAGGTGAGcctaatatatcatatatatgctCTCGTTACTATCGAGCACCTGAACTCATATTTGGAGCAACTGAATATACTACTGCAATTGATATGTGGTCTGTGGGCTGTGTCCTTGCTGAGCTGCTCTTGGGACAGCCTCTATTCCCAGGGGAAAGTGGAGTTGATCAACTTGTTGAGATTATAAAGGTACTTGGGACACCAACTCGTGAGGAAATCAAATGCATGAATCCAAACTATACGGATTTTAAGTTCCCTCAAATCAAGGCTCACCCTTGGCATAAGATATTCCATAAGCGTATGCCCCCAGAAGCAGTAGATCTTGTTTCAAGACTGCTCCAGTATTCTCCGAACTTACGATGCACCGCTTTAGATGCATGTGTCCACCCATTTTTTGACGAACTCCGGGATCCTAACACCCGTCTCCCCAACGGGCGCCCTCTGCCGCCCCTCTTTAACTTCAAACCTCAAGAGCTAAAAGGAGCAACCTTGGAGATGCTATGCAAACTTGTCCCAGAACATGCTCCTGCTTCTGCatgttcttctttctttGGATGTAAGTACATTATCGTTTTGGCCGGAGGCAGCTCTAGGGTCAACTTCAGAGGGTTGTCCTGTGTTTTTCTCCAGTTGAAGCGGAAGTATTTCAGCTGGGTCCTTGGTAGTTtagCTTGGGAGCCTATGTCATTGCAAAGCATAGAGCCTGAAGATGATGACTCTGGTGTGGAGAGTGAAAACTTTGATTGGAACACTGAAGACGAGTTGGAAATTGAGAATTTTCAATCTTCATCTTCGAGTTTAACTGGCCTAAATGGAGATGGTATTACTGGGTCTGGGGAGGGAAGCTCATCTGCAGGTTCATCCAATTCCAAGATGTTCGATCACTTTGTTGGAATGGGATTTCCTGAAAAAGTGGTGTCCAAAGTAATTCAGGAGAACGGTGAGGACAATGCAGATTTAATACTCGAAACTCTCCTTACATACTCAGCTCTAGATACTCCACCACAGCAGCAACAGCAAATTGAATCAGACCCTTGCTCTTCAGACTATGAAGGGAGCTTTCTGGATGATTTCTCAGATATTGATAGCTTCTCAGACAACGAGGAAATTACAAATTCTGCGTCTGACAATGATGGCAAATTATTATCCTTGGTGAATATGGGGTACGGGGTGGATGAGGCCTCAATTGCCTTAGAAAGATGTGGTCCAGACTCCTCTCTTGCTGAAATAGTAGATTTTATATGTGCGGCTCAAGTGGCAAAGTCATCAGATACCCTTATTTTGGAAGAGAAGCAGCCACGGTTTAGTAACCTGCCTAAGCCAAAGAAACGAAATTATTACAAAGAAGAGGTTTTGGGAAGGAAAAGGCCAAGGGGACCCCTGAATGAAGAAGATGGTGAGATACTTCGCCTTCCAAATCCAATGATTGGGTTTGGTGTTCCTACTGAGCCACTCTTCATTACCGATAGAACACTTCCAGAAGCTGCCATTGGGCCTCCTTACTTCTACTTTGAGAATGTAGCACTTGCACCGAAAGGTGTCTGGCAGAAAATCTCAAGATTCTTGTATGATGTGGAGCCAGAATTTGTGGATTCAAAGTATTTCTGTGCAGCTGCCAGGAAAAGGGGCTATGTTCACAATCTTCCCATCAAGAACAGATTCCCTCTTGTTCCGCTTCCTCCACGGATTATACATGAGGCATTACCCCTAACAAGGAAATGGTGGCCTTCATGGGacgaaagaacaaaattaaattgcttACAGACATGCATTGGGAGTGCAAAACTCACAGAGAGAATTCGCAAAGCTATTGAAAACTATGATGGAGATCCACCTCTGCACATTCAGAAGAAAGTTATTGATGAATGTCGGAAGTGGAATTTGGTTTGGGTTGGAAGGAATAAGGTTGCCCCCCTGGAACCTGATGAAGTAGAAATGCTTTTGGGTTTCCCAAAGAACCACACAAGGGGAGGCGGAATAAGTAGGACTGACAGATACAAATCACTTGGTAATTCATTCCAGGTTGACACTGTTGCATACCACCTTTCAGTCCTGAAGGGATTGTACCCCAGTGGAATCAAcctgctttctcttttctctggAATTGGTGGTGCAGAAGTTGCACTTCACCGTCTTGGTATCCCTTTGAGGACTGTTGTGTCTGTAGAAAAATCAGAAGTGAATAGGAACATACTTAGAAGTTGGTGGGAACAGACTAACCAAAAGGGAAATTTGATTGACTTGGATGATGTTCGGCATCTAAATGGTGAAAAGTTAGAGCAGCTGATGAACACATTTGGGGGTTTTGATCTTGTTATTGGCGGTAGTCCATGCAATAACCTAACTGGAAGCAATAGGCACACCAGGGATGGACTTGAGGGTACTGATTCCTCCCTCTTTTTTGATTACTTTCGCATTCTAGACTTGGTGAAATGTATGACCAAAAAATATCAGTG 3110 0.4238 MASAVGKHGGDSMDVDKLPEGINEMKIKDEKDIDSAMVDGNGTETGHIIVTTIGGRDGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVYRVVKHYSKANQRMPLIYVKLYTYQICRALAYIHGCVRVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTDFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDACVHPFFDELRDPNTRLPNGRPLPPLFNFKPQELKGATLEMLCKLVPEHAPASACSSFFGCKYIIVLAGGSSRVNFRGLSCVFLQLKRKYFSWVLGSLAWEPMSLQSIEPEDDDSGVESENFDWNTEDELEIENFQSSSSSLTGLNGDGITGSGEGSSSAGSSNSKMFDHFVGMGFPEKVVSKVIQENGEDNADLILETLLTYSALDTPPQQQQQIESDPCSSDYEGSFLDDFSDIDSFSDNEEITNSASDNDGKLLSLVNMGYGVDEASIALERCGPDSSLAEIVDFICAAQVAKSSDTLILEEKQPRFSNLPKPKKRNYYKEEVLGRKRPRGPLNEEDGEILRLPNPMIGFGVPTEPLFITDRTLPEAAIGPPYFYFENVALAPKGVWQKISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRFPLVPLPPRIIHEALPLTRKWWPSWDERTKLNCLQTCIGSAKLTERIRKAIENYDGDPPLHIQKKVIDECRKWNLVWVGRNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKGLYPSGINLLSLFSGIGGAEVALHRLGIPLRTVVSVEKSEVNRNILRSWWEQTNQKGNLIDLDDVRHLNGEKLEQLMNTFGGFDLVIGGSPCNNLTGSNRHTRDGLEGTDSSLFFDYFRILDLVKCMTKKYQ 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00440 1036 Gene3D - 491 548 - -
Bva03g00440 1036 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 715 907 IPR029063 -
Bva03g00440 1036 Gene3D Transferase(Phosphotransferase) domain 1 146 394 - -
Bva03g00440 1036 Gene3D Vaccinia Virus protein VP39 706 782 IPR029063 -
Bva03g00440 1036 Gene3D Vaccinia Virus protein VP39 903 1036 IPR029063 -
Bva03g00440 1036 CDD STKc_GSK3 61 353 IPR039192 -
Bva03g00440 1036 Gene3D Phosphorylase Kinase; domain 1 50 145 - -
Bva03g00440 1036 ProSitePatterns Protein kinases ATP-binding region signature. 72 96 IPR017441 GO:0005524
Bva03g00440 1036 Pfam C-5 cytosine-specific DNA methylase 912 1026 IPR001525 GO:0008168
Bva03g00440 1036 SUPERFAMILY Protein kinase-like (PK-like) 65 374 IPR011009 -
Bva03g00440 1036 Pfam Protein kinase domain 66 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00440 1036 ProSiteProfiles Protein kinase domain profile. 66 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00440 1036 ProSiteProfiles SAM-dependent methyltransferase DRM-type domain profile. 706 1035 IPR030380 GO:0006306
Bva03g00440 1036 ProSiteProfiles C-5 cytosine-specific DNA methylase (Dnmt) domain profile. 911 1036 IPR001525 GO:0008168
Bva03g00440 1036 SMART serkin_6 66 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00440 1036 PANTHER DNA (CYTOSINE-5)-METHYLTRANSFERASE DRM1 456 1034 - -
Bva03g00440 1036 PANTHER DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED 456 1034 - -
Bva03g00440 1036 MobiDBLite consensus disorder prediction 480 506 - -
Bva03g00440 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Bva03g00440 1036 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 912 1027 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00440 Bva-Chr3 2564077 2579969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00440 66 394 MAP Kinase Gene Family AT1G73670 36.127 5.55e-52 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bva03g00440 Pkinase 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00440 - - gmx:100785996 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00440 03 2564077 2579969 Bva03g00440 03 2564077 2579969 ECH