Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00438 ATGGATTTTGAGAGTAGCTTCTCCTCCTCTCACTCTGGCGTTTTCCAGGAAACTGACCGGAAACCAGAAATCTCCGCCGCCATTCCCTTTCCGGTCCATCCAATCTGCAACGTCAACTTCAACGACACCGTTCACCCCAACCATTACTtccagcagcagcagcagggGAACCATTTCTACAGGTCTCACCCTGTTTTCACCCCGTCCACCGTGACTCCTTCTCCGGTCTCTCGTTCTCCGATCCCTTTGTTCGAGGCCTCGTCTTCCAGAGCTAATCCTTTTGAGTCATATCAATACACAACAAAGGATTTCCTTCGCTCCCATTACCATCACCAAGCAGCTCCAGCTGAAGTAGAAATGAGAATGGAATTTACACCACCACCAACTCCTGAAACCAAAATCGGATTAACCCTGGGAGGCGATTTTATGTATAGTTTCCCAGCTGCGAGAAGGAGCAACCAAAGCAACTTATGGGAATTTTCTTCCCAAAAAATTCCAACCCAGGCTTCGGTGCAAGGCTCTGGTCTTTTTGAAGGATTTGGATCAGCTGGAAAGATGAGGCTTCATGACGAGCTGGCCTCATTGATCACCTTGGGAAATGAATGGGAAGCTGACACACCACagacaaagaacaaaaagaagaagaggtcCCAGAAATCAACCAAACACAACCCAAACACCACCCCCATCATCATTAAGGGCCAGTGGACACCAGAAGAGGATAGTGTCCTTATCCAGCTGGTTGAGCGACATGGGCTCAAAAAATGGTCTGAAATTGCTAAGTCATTGACTGGAAGAGTGGGAAAGCAGTGCAGAGAGAGATGGCACAATCATCTCCGGCCGGACATTAGGAAGGATGCTTGGACAACTGAAGAGGATTACATTCTGATCGAAGCCCACCAGCAAGTGGGGAACAGATGGGCGGAGATCGCCCGAAGGCTGCCGGGTCGTACGGAGAATACGATAAAGAATCATTGGAACGCCACCAAGCGCCGCCAGAATTCCAAGAGGTACAGGAACAGAGCCTCCACTTCGCAGCCATCCTCCCTTCAGGTGTACATCATGCATGTCACCGAGGCTGAAGCCGCCGCCAAGAGAGCCATGGGAATGCAAGAGGAGAACAACAAAAACCATGACCACGAGGAGGAGGACCACGATGACTATGATGACGAGAGCATCTCCGATGACGAAATTGACTTCATGAGCTCCGAGGAGTGGGCTCCGGCTGCTGCTACAGATGGTGACGGTAATGGTGGTGATGGCTATGGCATTGGAGGGCAGGAAGCTGGACACGTGGCTGCTGTTCCTAACATGTTTGCTGGAAATGGTGGGTCTTCGGTGGAGGTGGCTGCAAACAATGGCCCTGCGGAGGAGGAAGAGAACTACGGCATGTCCATGGAGATGGCAAGCTTGGTTCAAGCCCAGGATGTTCGGATGAAGAAGGAAATGGATCTTATGGAGATGATTTGCGGCAAGAACCAGCACCATTG 1490 0.4919 MDFESSFSSSHSGVFQETDRKPEISAAIPFPVHPICNVNFNDTVHPNHYFQQQQQGNHFYRSHPVFTPSTVTPSPVSRSPIPLFEASSSRANPFESYQYTTKDFLRSHYHHQAAPAEVEMRMEFTPPPTPETKIGLTLGGDFMYSFPAARRSNQSNLWEFSSQKIPTQASVQGSGLFEGFGSAGKMRLHDELASLITLGNEWEADTPQTKNKKKKRSQKSTKHNPNTTPIIIKGQWTPEEDSVLIQLVERHGLKKWSEIAKSLTGRVGKQCRERWHNHLRPDIRKDAWTTEEDYILIEAHQQVGNRWAEIARRLPGRTENTIKNHWNATKRRQNSKRYRNRASTSQPSSLQVYIMHVTEAEAAAKRAMGMQEENNKNHDHEEEDHDDYDDESISDDEIDFMSSEEWAPAAATDGDGNGGDGYGIGGQEAGHVAAVPNMFAGNGGSSVEVAANNGPAEEEENYGMSMEMASLVQAQDVRMKKEMDLMEMICGKNQHH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00438 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 228 283 IPR017930 -
Bva03g00438 496 MobiDBLite consensus disorder prediction 1 20 - -
Bva03g00438 496 MobiDBLite consensus disorder prediction 203 230 - -
Bva03g00438 496 MobiDBLite consensus disorder prediction 1 15 - -
Bva03g00438 496 Gene3D - 232 284 - -
Bva03g00438 496 MobiDBLite consensus disorder prediction 373 393 - -
Bva03g00438 496 CDD SANT 287 330 IPR001005 -
Bva03g00438 496 Gene3D - 286 352 - -
Bva03g00438 496 SMART sant 232 281 IPR001005 -
Bva03g00438 496 SMART sant 284 332 IPR001005 -
Bva03g00438 496 PANTHER MYB DOMAIN PROTEIN 100-RELATED 208 380 - -
Bva03g00438 496 CDD SANT 236 279 IPR001005 -
Bva03g00438 496 ProSiteProfiles Myb-like domain profile. 228 279 IPR001005 -
Bva03g00438 496 Pfam Myb-like DNA-binding domain 236 289 - -
Bva03g00438 496 PANTHER MYB PROTEIN-RELATED 208 380 - -
Bva03g00438 496 SUPERFAMILY Homeodomain-like 232 326 IPR009057 -
Bva03g00438 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 284 334 IPR017930 -
Bva03g00438 496 ProSiteProfiles Myb-like domain profile. 280 330 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00438 Bva-Chr3 2548484 2550943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00438 231 379 MYB Transcription Factor Family AT4G18770 62.500 5.19e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g00438 Myb_DNA-bind_6 4.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00438 K09422 - zju:112491467 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00438 03 2548484 2550943 Bva03g00438 03 2548484 2550943 ECH