Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00432 ATGGCCTACGTGAGAAGCAGGGCCAATCCACTCCTCAGCACTATACCACACTTCCTCACATGGCGAAACCTTGGATTCCGCTCTATTTGCTGCGGACGACTCGGCTTTTCGACTCAGTCACAACTCGATCTCGACCAACCCCTTGCAGGAACAAAGGTTCTCGACACTTACAAAGAAGAATTCGAAATTGGGTCACGGTTGATAACGCTTGAAACTGGCAAGGTCGCTCGCTTTGCTAATGGTGCTGTTGTTTTGGGCGTGGAAGAGACTAAAGTTTTATCTACAGTTGCCTCTGCTAAAGGAGATGCTGTTCGTGATTTTCTACCTCTCACTGTTGATTATCAAGAGAAACAATTTGCTCAAGGTGTGATTCCAAATACATTCATGAGGAGGGAAGGTGCCCCAAAGGAACGTGAACTTTTGTGTGGCCGCCTTATTGACCGACCAATTCGACCATTATTTCCCACTGGATTTTACCATGAAGTTCAGGTAATGGCAAGTGTTCTTTCTTCTGATGGAAAACAAGATCCAGATGTACTGGCAGCTAATGCAACATCGGCTGCTCTTATGTTATCAGATATTCCTTGGGATGGCCCCATAGGAGTGATTCGTATTGGGAGGATATGTGGGCAGTTTGTTGTTAATCCAACCATGGATGagCTAAGTTTAAGTGATCTTAACTTGGTATATGCCTGTACAAGGGACAAAACTTTAATGATTGATGTGCAAGCTCGTGAGATATCTGAAAAAGATCTGGAAGCTGGTTTGAGACTTGCTCATCCTGAGGCAGTTAAGTATATTGAACCTCAAATCAGACTTGCTGCTAAAGCCGGTAAATCTAAGAAGGAATACAAATTGTCTATGCTGTCGGACAGAACACTGGAGAAAGTTAGTAACTTGGCAGGAGCACCTATTGAAGCTGTTTTCACTGATCCTACTTATGGAAAGTTTGAACGTGGAGAGGCATTAGATAATATTTCACAAGATGTAAAGAAAGCACTCGAAGAAGAATGTGATGAAGAAAGCTTAAAAGTTTTGTCAAAAGCAGTAGACACAGTGAGGAAAAACgTTGTTCGCAAAAGAATTCTTGCTGATGGATTTAGGGTTGATGGGAGACGGCTTGATGAAGTTAGGCCATTGTATTGTGAAGCTGGGAACTTACCTATTCTGCATGGCTCTGCACTTTTTTCTCGTGGGGACACACAGGTTCTCTGTACTGTAACATTAGGAGCACCTGAAGATGCTCAACGTCTGGAGTCTTTAGTTGGTCCTCCAACAAAGCGATTCATGCTCCACTATAGTTTTCCACCATTTTCTATAAATGAAGTTGGTAAACGTGTTGGTCTGAACAGACGTGAAGTTGGACATGGGACTCTTGCTGAGAAAGCTCTTCTTGCTGTCTTGCCTCCTGAAGATGATTTTCCTTACACTGTACGTGTCAACTCAGAAGTCATGGCTTCAGATGGTTCAACATCAATGGCAACAGTCTGTGGAGGTAGTATGGCTCTGATGGATGCTGGCATTCCAGTACGTGAGCATGTTGCTGGTGTTTCTGTGGGTCTTGTTAGTGAAATTGATCCATCCACTGGTGATATCTGGAATTATCGCATATTGACTGATATTTTGggcTTGGAAGATCATTTGGGTGACATGGACTTCAAGATTTCTGGAACTCAAAATGGAGTTACAGCTATTCAGTTGGATATAAAACCAGCTGGGATTCCTCTAGATATCATATGTGAGTGTTTGGAGCCTGCTCGTAAAGCTCGTCTTCAGATTCTTGACCACATGAAGCATGAGATCAACACTCCTCGTAATCAGGACAAAAACAATGCTCCACGACTAGTAACTTTAAAGTACAGCAATGAAGATATTCGCCGCCTGATTGGGCCACTTGGTGTTCtcaagagaaaaattgaagagaagacAGGTGCACGGATATCAGTTGGTGACGGAACGCTTACAATAATTGCTAAGAATCAATCTGCAATGGATAAAGTACTAGAAGAGATTGAATATGTAGTTGGCCGTGAAATTGAAGTTGGAGGGGTATACAAAGGTGTTGTGACCTCTATAAAAGAGTATGGAGCGTTTGTGGAGTTTAATGGTGGCCAGCAGGGGCTTCTACATATTTCTGAGTTGTCACATGAACCGGTCTCCCGGGTTTCTGAAGTGGTATCTGTTGGCCAGCAACTTTCGGTGGTGTGCATAGGCCAAGATGTTCGTGGCAACATTAAATTATCTCTAAAAGCAACTTTGCCTCGTCCCAGAGGATTGGATGGTAATGATAGTGTTGAAGGATCTGTTCCATCTGCTAAAAAGACACCCAACAGATGGGCTCCAGCTGGAAATATGTCTATTATACAGGAACAACAAAGCTCTGTTTCTGAGTTGCCTGGAGACAAACACGAGGTGGGTGAAGCAAAACCCCCTGCCTCGAAAATACCATCGATTTTAATACGCAGTCCCGAGGAGTGTGACGAGGAAGAAAAAGCTACCAGCTTGAATCATCCTTCAAAGAAGGCCCGAAAGTCCGTTAATGGTTCACAATTAGATCGGAAGTTAAAACATCGTCAATCtcaagatgatgaaaatgattctttattttctattttggattCCTTCCCTTATACAAAtgttaagaaatcaaaatctctCTCCCAAAAGGAGGAATCAAATTCTGTTCATGCAACAGGTGGAGATGAGGAGGAAGCTGGAGACAGGGAACCAGTAACCTCACAAAATCTGAAGCTTGGAACAAAAGTTACTGCCACGGTTTATCAAGTTCGTGCACGTGGGTTGGTATTAGATTTGGGTGGAGGACTCCGAGGAATGCACCGGTTTGAGACAGAGAGTCAGAGGGACCTTGAGGTAGGTGACAAGATACGCGTCGTGTGTTCGAGCTTTTCCAGTAAAGGGATTCCATATCATCGTCATGGATTCATGGTGACCGCAGTTGTGCCATTGACAATTCTTGTGTTGCTTTCAACGGTCTGTGGAAACCATGCAGACCCACGAGATGGTGTAGTCGCACGCACATGCGGGCACACCCCTGCTCGCGATATGGCCAAATATAAACTGATTTATGAGGAACTCGTGCATGCAATGAAGGGAGAAATGGGCCGTAACAAATTTTCCATTAACGAATTTGGTGAACCACCTGATCGTGTCTATGTATTCGCGCAGTGCATGAATGATATTTCTTCATCACAATGCATACGTTGCTTCGACACCGTCAAAGACCTTCTTCCTGGTTGCTTTCCTTCTACGGGTGGTCGTGTTTATTCCGATTACTGCTTTATCAGGGCAGAGAATTATAGTTTCTTGCAGGAAAGCGTTGGACCTGATGATTTAAAGaGATGCGGTGACAGCACAGTAGGGGTACCAATGTTTTCAAGCTTGGCGATATATCTAATCAATCAAATGGCATTGAAGGCACCGGAGAAAGGAGGCTTTATAGCTTTGCAAGTGGAAGTGCCTTCAGGTTTGGAGGTCTATGGTCTGGCTACCTGTTGGCAGACGTTGGATCATGATATGTGTTCTGCCTGCCTTGCAAATGCAGCCAGCACTGCCATATCTTGCCTACCATCAGCTGATGCCCGTGTGCTTAATGCCGGCTGCTTTTTACATTATGCTGATTATGACTTCACCGCAGAGTCAAGAGCCAGAAAAGCCGCAGATACTTTCCTAATGTACTTGGCATACGTTCTTGCTGCAATTGCTGTGTGTTTGTTGGCTATTTTTGTTGGTTACTATGCGGGTAAAAGGACTTATGACCTAAGTAGTTCTGCAAGGAAAAGACAAGGATCCGAGGTGGACTTGCAAGCATTAAGGAAGAGGTTGCAGTTCATGCAATTCAAGTACTCAACATTAGAGAAGGCAACCGAAGGCTTCAATGAATCCCATAAGCTTGGTCAAGGAGGATATGGTGAAGTATACAAGgGAACCTTGCCAGATGGTAGAGAAATTGCAATAAAACATTTGTTTAATAGGGGCAATGGACAGGCAGATGATGTTATCAATGAAATGGATGTTATCAGCAGAGCTCAACACAAGAATCTGGTCCGTTTCCTTGGCTGCTGCTTCACCTCATATGACAGCTTTCTTATCTATGAATTTCTTGTAAACAGAAGCCTCAACATCATCTTATTTGAcccagagaagagaaaagaattagACTGGCCAAAAAGACGTGGGATAATAATTGGAACAGCTGAAGGTTTGGAATACCTACACGATAATAGTCAAGTGAGGATTATTCACAGGGATATCAAAGCTAGCAACATATTATTGGACTTGAAACACAAGCCAAAGATAGCCGATTTTGGCCTGGCTAGGTTTTATTCCAACAAGAAGACTACTGTCAATACTACAATTGCAGGCACATTGGGATACATGGCCCCAGAATATCTTGCTGAGGGTCGGTTAACAGAAAAAGTAGATGTCTATAGCTTTGGGGTGCTAGTGCTTGAAATTGTATGTGGAGTTGAGAACAGCAAATTTCAACCTGCAGAAACCTTTGAAACTCTAGTTACTCATGCATGGAAGCATTTCCAATTGAACACTGCCAcagaaattattgataaaagcATGGAAGGTGAAGACATTGAAGAAATAACAAGAGCTGTCCAGGTGGGACTTTTGTGCACTCAAGAGTTACCATCCTTGCGTCCTAACATGACAGAGGTGACAAAAATGCTTAAACAAAAGGATACTGAATTGCCAGCACCTTCTAAACCACCGTACATTGGCTATTCTTTGGAGTTGTCAAGTTCAACTGGTTTTAGTTCTAATTCTTCTAGGCCCTTAAATGATTTTGTATA 4823 0.4224 MAYVRSRANPLLSTIPHFLTWRNLGFRSICCGRLGFSTQSQLDLDQPLAGTKVLDTYKEEFEIGSRLITLETGKVARFANGAVVLGVEETKVLSTVASAKGDAVRDFLPLTVDYQEKQFAQGVIPNTFMRREGAPKERELLCGRLIDRPIRPLFPTGFYHEVQVMASVLSSDGKQDPDVLAANATSAALMLSDIPWDGPIGVIRIGRICGQFVVNPTMDELSLSDLNLVYACTRDKTLMIDVQAREISEKDLEAGLRLAHPEAVKYIEPQIRLAAKAGKSKKEYKLSMLSDRTLEKVSNLAGAPIEAVFTDPTYGKFERGEALDNISQDVKKALEEECDEESLKVLSKAVDTVRKNVVRKRILADGFRVDGRRLDEVRPLYCEAGNLPILHGSALFSRGDTQVLCTVTLGAPEDAQRLESLVGPPTKRFMLHYSFPPFSINEVGKRVGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRVNSEVMASDGSTSMATVCGGSMALMDAGIPVREHVAGVSVGLVSEIDPSTGDIWNYRILTDILGLEDHLGDMDFKISGTQNGVTAIQLDIKPAGIPLDIICECLEPARKARLQILDHMKHEINTPRNQDKNNAPRLVTLKYSNEDIRRLIGPLGVLKRKIEEKTGARISVGDGTLTIIAKNQSAMDKVLEEIEYVVGREIEVGGVYKGVVTSIKEYGAFVEFNGGQQGLLHISELSHEPVSRVSEVVSVGQQLSVVCIGQDVRGNIKLSLKATLPRPRGLDGNDSVEGSVPSAKKTPNRWAPAGNMSIIQEQQSSVSELPGDKHEVGEAKPPASKIPSILIRSPEECDEEEKATSLNHPSKKARKSVNGSQLDRKLKHRQSQDDENDSLFSILDSFPYTNVKKSKSLSQKEESNSVHATGGDEEEAGDREPVTSQNLKLGTKVTATVYQVRARGLVLDLGGGLRGMHRFETESQRDLEVGDKIRVVCSSFSSKGIPYHRHGFMVTAVVPLTILVLLSTVCGNHADPRDGVVARTCGHTPARDMAKYKLIYEELVHAMKGEMGRNKFSINEFGEPPDRVYVFAQCMNDISSSQCIRCFDTVKDLLPGCFPSTGGRVYSDYCFIRAENYSFLQESVGPDDLKRCGDSTVGVPMFSSLAIYLINQMALKAPEKGGFIALQVEVPSGLEVYGLATCWQTLDHDMCSACLANAASTAISCLPSADARVLNAGCFLHYADYDFTAESRARKAADTFLMYLAYVLAAIAVCLLAIFVGYYAGKRTYDLSSSARKRQGSEVDLQALRKRLQFMQFKYSTLEKATEGFNESHKLGQGGYGEVYKGTLPDGREIAIKHLFNRGNGQADDVINEMDVISRAQHKNLVRFLGCCFTSYDSFLIYEFLVNRSLNIILFDPEKRKELDWPKRRGIIIGTAEGLEYLHDNSQVRIIHRDIKASNILLDLKHKPKIADFGLARFYSNKKTTVNTTIAGTLGYMAPEYLAEGRLTEKVDVYSFGVLVLEIVCGVENSKFQPAETFETLVTHAWKHFQLNTATEIIDKSMEGEDIEEITRAVQVGLLCTQELPSLRPNMTEVTKMLKQKDTELPAPSKPPYIGYSLELSSSTGFSSNSSRPLNDFV 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00432 1607 Pfam KH domain 620 672 IPR004088 GO:0003723
Bva03g00432 1607 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 47 833 IPR012162 GO:0003723|GO:0004654|GO:0006402
Bva03g00432 1607 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL 47 833 - -
Bva03g00432 1607 ProSiteProfiles Type-1 KH domain profile. 613 671 - -
Bva03g00432 1607 SMART S1_6 680 750 IPR022967 -
Bva03g00432 1607 SMART S1_6 917 979 IPR022967 -
Bva03g00432 1607 SUPERFAMILY Ribonuclease PH domain 2-like 189 282 IPR036345 -
Bva03g00432 1607 MobiDBLite consensus disorder prediction 846 864 - -
Bva03g00432 1607 Gene3D - 679 752 IPR012340 -
Bva03g00432 1607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1419 1431 IPR008271 GO:0004672|GO:0006468
Bva03g00432 1607 SUPERFAMILY Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 277 379 IPR036456 GO:0003723|GO:0006396
Bva03g00432 1607 Gene3D - 1128 1216 IPR038408 -
Bva03g00432 1607 Gene3D - 1007 1108 IPR038408 -
Bva03g00432 1607 TIGRFAM polynuc_phos: polyribonucleotide nucleotidyltransferase 63 751 IPR012162 GO:0003723|GO:0004654|GO:0006402
Bva03g00432 1607 Gene3D Transferase(Phosphotransferase) domain 1 1374 1575 - -
Bva03g00432 1607 SMART serkin_6 1298 1567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00432 1607 SUPERFAMILY Ribosomal protein S5 domain 2-like 344 548 IPR020568 -
Bva03g00432 1607 ProSiteProfiles Protein kinase domain profile. 1298 1583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00432 1607 SUPERFAMILY Protein kinase-like (PK-like) 1281 1568 IPR011009 -
Bva03g00432 1607 Pfam 3' exoribonuclease family, domain 1 376 509 IPR001247 -
Bva03g00432 1607 Pfam 3' exoribonuclease family, domain 1 66 195 IPR001247 -
Bva03g00432 1607 Gene3D - 53 287 IPR027408 -
Bva03g00432 1607 Gene3D K Homology domain, type 1 610 675 IPR036612 GO:0003723
Bva03g00432 1607 Pfam S1 RNA binding domain 679 750 IPR003029 GO:0003676
Bva03g00432 1607 ProSiteProfiles Gnk2-homologous domain profile. 1113 1216 IPR002902 -
Bva03g00432 1607 Hamap Polyribonucleotide nucleotidyltransferase [pnp]. 55 753 IPR012162 GO:0003723|GO:0004654|GO:0006402
Bva03g00432 1607 ProSiteProfiles S1 domain profile. 682 750 IPR003029 GO:0003676
Bva03g00432 1607 Gene3D Phosphorylase Kinase; domain 1 1258 1373 - -
Bva03g00432 1607 ProSitePatterns Protein kinases ATP-binding region signature. 1304 1326 IPR017441 GO:0005524
Bva03g00432 1607 Pfam Polyribonucleotide nucleotidyltransferase, RNA binding domain 294 373 IPR015848 GO:0003723|GO:0006396
Bva03g00432 1607 MobiDBLite consensus disorder prediction 821 837 - -
Bva03g00432 1607 SMART kh_6 595 676 IPR004087 GO:0003676
Bva03g00432 1607 SUPERFAMILY Nucleic acid-binding proteins 669 754 IPR012340 -
Bva03g00432 1607 CDD RNase_PH_PNPase_1 57 284 - -
Bva03g00432 1607 MobiDBLite consensus disorder prediction 884 910 - -
Bva03g00432 1607 ProSiteProfiles Gnk2-homologous domain profile. 1007 1108 IPR002902 -
Bva03g00432 1607 MobiDBLite consensus disorder prediction 782 798 - -
Bva03g00432 1607 Pfam 3' exoribonuclease family, domain 2 198 260 IPR015847 -
Bva03g00432 1607 SUPERFAMILY Ribosomal protein S5 domain 2-like 54 195 IPR020568 -
Bva03g00432 1607 MobiDBLite consensus disorder prediction 882 914 - -
Bva03g00432 1607 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 612 687 IPR036612 GO:0003723
Bva03g00432 1607 MobiDBLite consensus disorder prediction 756 867 - -
Bva03g00432 1607 Gene3D - 288 609 IPR027408 -
Bva03g00432 1607 Pfam Protein kinase domain 1298 1562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00432 1607 Pfam Salt stress response/antifungal 1162 1214 IPR002902 -
Bva03g00432 1607 Pfam Salt stress response/antifungal 1022 1106 IPR002902 -
Bva03g00432 1607 CDD RNase_PH_PNPase_2 376 604 - -
Bva03g00432 1607 Coils Coil 1274 1294 - -
Bva03g00432 1607 SUPERFAMILY Ribonuclease PH domain 2-like 503 606 IPR036345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00432 Bva-Chr3 2504774 2519064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00432 983 1587 Receptor kinase-like Gene Family AT4G28670 47.200 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva03g00432 Pkinase 8.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00432 K00962 - qsu:111997513 1473.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00432 03 2504774 2519064 Bva03g00432 03 2504774 2519064 ECH