Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00431 ATGTCTTGCTCGAATCCCAGCTACTTCTACTTCAATGACCCATCATGGGTTCTCACTACTATCATTTTCCTCTTATATTTCACTTTCTCGGTACTCTCCGATCCACGAATTTCACAAGCTGGTCTCTACTGTGGTGATGTCAAAGCTCCATTGAAAGCAAACTACGTGCCCAGTTTCGTCAAAGAGATGGAGAGCCTTTCCCAGCTCGTTGCCACCAGCAATTGGGGAGTTCACTTTGTGAACTCGACCGTTCCTATTTATGGCTTTGCTCAGTGCTTTCATGACCTTTCTCGAACTGATTGCCTTCTGTGCTATGCTGCTAGCCGCACCAAGCTCCCTCGCTGCCTTCCCTCTGTCTCTGCTCGCATTTATCTCGATGGCTGCTTCCTTCGCTATGACAACTACAACTTTTACACAGAAGACACTAACCCAAAAAGGGACACAGTGAATTGCAGCTCCCAGTATGGTTTGGTGGTtggtgagaaagaaaaattggagcTTTCCAAGAGTGTTGGCCAAGTGATTGACAATGTGTCGAGGATTGCTGTGTCAGAGGGAAAGGGGTTTGGAGTGGGAGAAGTGGAGGGAATTTATGCCTTGGCACAATGTTGGAAGACCGTTGGAGTAAATGGGTGTAGGAATTGCTTAAACAAGGCGGCGAAGCAGGTAAGAGGTTGCGTGCCCAATAGGGAAGGGAGAGCCTTGAATGCTGGGTGTTATTTGAGATATTCCACTGTGAAGTTCTACGACGAAGGGGATAAAGCAGAGGGTGGAAATGGGTCTTTTAGAAGAGGAGCAATCATAGCAACAGTGTTAGCTGCGGCCGCAATTATAATGCTCTCCCTCTCTGCCTCTTATGCAGTCTTTTCAAGATTATCGAAGATAAGAAGAGAGAGAAGTAATCTTGGCCCGATTTCCACTTCCCTTAGCAGATCTAGCTTgaatttaaaCATTGAAGGCCCTGAGAGTCTCCTGGTCTATGAGTACCTACCTAACAAGAGCCTAGATCAGTTCATTTTCGAAAAGAATAGAACTCAGATTCTAACTTGGAAGCAGCGGTTTGATATAATTCTCGGGACGGCAGAAGGGCTTGCATATCTTCATGGAGGCTCTAAAATAAGAATCATTCACAGAGATATCAAAAGCAGCAATATTCTTCTTGATAGTAATATGACTCCAAAGATTGCTGATTTTGGCCTTGCTCGATGTTTTGGTACTGATAAAACACACCTAAGCACTGGAATTGCAGGAACACTAGGTTATATGGCTCCTGAGTATCTTATTCGAGGGCAACTTACAGATAAAGCTGATGTCTATAGTTATGGAGTACTGCTTCTGGAGATAATATGTGGCAGGAGAAATAATGTCTTCAGAGAGGACTCTAGTTCCCTTCTACAAACAGTTTGGAAACTTTCTCGTTCAAACAGGGTGACAGAAGCTGTAGATCCTTGCTTGGGAGCTGTTTTTCCTGCAAAAGAAACATCAACTGTGCTTCAAATTGGGCTTCTATGCACACAAGCTTCTGCTTCCCTGAGGCCATCCATGGCTGAGGTTGTTTACATGTTAAGTAATCCAACTACGGATATTCCTGTACCAAATCAACCCCCTTTTATGAACACTGGAATGCCAGACTCAGACAGCTCCATTAGATCTTTCAGCACAAACAGTTTTGTATCAAATgctttaaagaaaattggagTGTCACGCAGCTCCTCAGAGTCCTCTAGTATGCGTTCAGATGGGCCAGCAAGAAGTGAAGAACCAATCATGGAAGTCTG 1778 0.4342 MSCSNPSYFYFNDPSWVLTTIIFLLYFTFSVLSDPRISQAGLYCGDVKAPLKANYVPSFVKEMESLSQLVATSNWGVHFVNSTVPIYGFAQCFHDLSRTDCLLCYAASRTKLPRCLPSVSARIYLDGCFLRYDNYNFYTEDTNPKRDTVNCSSQYGLVVGEKEKLELSKSVGQVIDNVSRIAVSEGKGFGVGEVEGIYALAQCWKTVGVNGCRNCLNKAAKQVRGCVPNREGRALNAGCYLRYSTVKFYDEGDKAEGGNGSFRRGAIIATVLAAAAIIMLSLSASYAVFSRLSKIRRERSNLGPISTSLSRSSLNLNIEGPESLLVYEYLPNKSLDQFIFEKNRTQILTWKQRFDIILGTAEGLAYLHGGSKIRIIHRDIKSSNILLDSNMTPKIADFGLARCFGTDKTHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSYGVLLLEIICGRRNNVFREDSSSLLQTVWKLSRSNRVTEAVDPCLGAVFPAKETSTVLQIGLLCTQASASLRPSMAEVVYMLSNPTTDIPVPNQPPFMNTGMPDSDSSIRSFSTNSFVSNALKKIGVSRSSSESSSMRSDGPARSEEPIMEV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00431 592 MobiDBLite consensus disorder prediction 566 581 - -
Bva03g00431 592 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 316 580 - -
Bva03g00431 592 Pfam Protein tyrosine and serine/threonine kinase 319 521 IPR001245 GO:0004672|GO:0006468
Bva03g00431 592 Gene3D - 43 137 IPR038408 -
Bva03g00431 592 Gene3D - 161 248 IPR038408 -
Bva03g00431 592 Pfam Salt stress response/antifungal 169 245 IPR002902 -
Bva03g00431 592 Pfam Salt stress response/antifungal 78 135 IPR002902 -
Bva03g00431 592 SUPERFAMILY Protein kinase-like (PK-like) 320 554 IPR011009 -
Bva03g00431 592 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 316 580 - -
Bva03g00431 592 ProSiteProfiles Gnk2-homologous domain profile. 37 137 IPR002902 -
Bva03g00431 592 ProSiteProfiles Protein kinase domain profile. 183 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00431 592 SMART serkin_6 189 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00431 592 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 27 315 - -
Bva03g00431 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 375 387 IPR008271 GO:0004672|GO:0006468
Bva03g00431 592 Gene3D Transferase(Phosphotransferase) domain 1 330 529 - -
Bva03g00431 592 ProSiteProfiles Gnk2-homologous domain profile. 146 248 IPR002902 -
Bva03g00431 592 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 315 - -
Bva03g00431 592 MobiDBLite consensus disorder prediction 566 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00431 Bva-Chr3 2500400 2503895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00431 314 419 Receptor kinase-like Gene Family AT5G40380 76.415 3.26e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva03g00431 PK_Tyr_Ser-Thr 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00431 - - ccaj:109803078 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00431 03 2500400 2503895 Bva03g00431 03 2500400 2503895 ECH