Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00429 ATGTCTGTTGGTATAGTTTCTGGTTTCCATCTGAATTTAAACGACAACACGTCAAGATGGAGGAAGAACTACAATTTAATCAGATGTTGTAATAGTAGAAGGAACTGGAAAAAGGCAGCAACGCAGAAGAATTATTATGAGTTGCTTGGAGTTTCTGCTGATTCAAGTGCCCAAGAAATCAAAGAAGCTTACCGGAAGCTGCAAAAAAGATATCACCCTGATGTTGCTGGTCAAAAGGGTCACGAGCTTACACTAAAGCTCAATAAGGCTTACGAAGTGCTGATGGAAAAGGAGCggagaagaaaatatgatgAATCAATAGGTCAGATGAGAGTGAGATTTGCGGAAAACGGCACTCTCTTGGGTTACAGCACATGGAACGGACCTTTAAGACCACGAGCTTTATTTGTTGATGAAAATGCATGCATAGGATGCAGAGAATGTGTGCATCATGCAAGGAATACATTCATAATGGATGAAGCTGTTGGTTCTGCAAGGGTTAAAGTTCAATATGGAGACGCAAACCAGAAAATTGAGGTGTCAGTTGAGTCATGCCCAGTTAACTGCATCTATTGGGTGGAGACAGAAGAATTGGCTGCGCTCGAGTTCCTGATCCAACCTCAACCAAAGGAAGGGTATGGCGTATTTGGAGGAGGATGGGAAAGGcctaaaaatgttttcactGCAGCCAAGTCCCTGAACCAACAGCTAAAGCGACAAGCAGAAACTGGAAACAATCAAAGAACTGGAGGAGATTTTGAAGAAACCTCTGCTCAAGCTGAAGCTCGAGCTAATGCAagtatgaagatgaagatgggGAGTGTCTTGAAAATTTGGAACTGGGTGAAGGATACTTTTGGCATGAATGCTAATCAGGGATA 881 0.403 MSVGIVSGFHLNLNDNTSRWRKNYNLIRCCNSRRNWKKAATQKNYYELLGVSADSSAQEIKEAYRKLQKRYHPDVAGQKGHELTLKLNKAYEVLMEKERRRKYDESIGQMRVRFAENGTLLGYSTWNGPLRPRALFVDENACIGCRECVHHARNTFIMDEAVGSARVKVQYGDANQKIEVSVESCPVNCIYWVETEELAALEFLIQPQPKEGYGVFGGGWERPKNVFTAAKSLNQQLKRQAETGNNQRTGGDFEETSAQAEARANASMKMKMGSVLKIWNWVKDTFGMNANQG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00429 293 Gene3D DnaJ domain 28 118 IPR036869 -
Bva03g00429 293 CDD DnaJ 44 94 IPR001623 -
Bva03g00429 293 SMART dnaj_3 43 99 IPR001623 -
Bva03g00429 293 Pfam DnaJ domain 44 104 IPR001623 -
Bva03g00429 293 PRINTS DnaJ domain signature 46 64 IPR001623 -
Bva03g00429 293 PRINTS DnaJ domain signature 64 79 IPR001623 -
Bva03g00429 293 Pfam 4Fe-4S single cluster domain of Ferredoxin I 137 191 - -
Bva03g00429 293 ProSiteProfiles dnaJ domain profile. 44 107 IPR001623 -
Bva03g00429 293 Gene3D - 133 194 - -
Bva03g00429 293 PANTHER 3FE-4S FERREDOXIN 8 291 - -
Bva03g00429 293 PANTHER CHAPERONE PROTEIN DNAJ C76, CHLOROPLASTIC 8 291 - -
Bva03g00429 293 SUPERFAMILY 4Fe-4S ferredoxins 135 194 - -
Bva03g00429 293 SUPERFAMILY Chaperone J-domain 40 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00429 Bva-Chr3 2494254 2496056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00429 45 110 C2H2 Transcription Factor Family AT1G74250 38.356 7.14e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00429 - - gmx:100776887 424.861