Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00420 ATGGCTGGATTGGaggaattgaaaaagaagcttGCCCCCTTGTTTGATGCTGAGAAGGGTTTCTCAACAGGCTCCACATTGGACCCTTGTGATTCATACACACTGTCGGATGGTGGGACTGTTAATTTACTGAGCAGATCATATGGGGTGTACAATATCAACGAGCTCGGGTTGCAAAAGTGCACGTCTCGATCTGTAGATGAAACTGATCATAGTGAAAAGACATATAGATGTGCTTCCCATGAGATGAGAGTATTTGGAGCAATTGGTAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATACATATACCAACTCACAGAATTCTAGCATTGAAAAAGATCAATATCTTTGAGAAGGAGAAAAGGCAACAACTTCTTACGGAGATAAGAACATTATGTGAAGCACCTTGTTATCAGGGTCTTGTAGAATTCCATGGGGCATTTTACGTTCCAGACTCTGGACAAATTAGCATAGCATTGGAGTATATGGACGGAGGATCACTTGCAGATATCTTACGAATGCATAAAAGAATACCTGAACCTGTTCTTTCATCCATGTTTCAGAAGCTCCTGCATGGGCTAAGCTATTTGCATGGAGTCAGACATTTAGTTCACAGAGACATAAAGCCAGCAAACTTACTGGTAAATCTCAAGGGGGAGCCAAAAATCACTGATTTTGGTATAAGTGCTGGATTAGAGAATTCTGTGGCAATGTGTGCTACATTTGTTGGAACTGTCACATACATGTCACCTGAGCGAATTAGAAATGAAAGCTATTCTTATCCTGCTGATATATGGAGCCTTGGCCTTTCTCTCCTTGAGTGTGGAACAGGTGAATTCCCATATACTGCCAATGAAGGTCCGGTCAATCTTATGTTACAGATCTTAGATGATCCATCACCAACACCaacaaaacacaatttttCACCTGAATTCTGCTCCTTTGTTGATGCCTGCCTACAGAAAGATCCAGATGCAAGGCCAACTGCAGACCAGCTGCTTTTGCACCCctttattacaaaatatgaGAAGGCCCAGGTAGATTTAGCAGGATTTGTCCGAAGTGTTTTTGATCCAACACAGAGATTGAAGGACTTGGCTGATATGTTGACAATACATTATTACTTACTATTTGACGGGCCAGATGCTCTCTGGCAACATACCAGGAACTTATATAATGAAAGCTCGACTTTCAGtttctCCGGGAAAGAACATCTTGGTCCAAATGATATCTTTACAACCACGTCAAGTATTCGAAGCACATTAATTGGTGACTGGCCTCCTGAAAAACTTGTGCACGTTGTTGAAAAGCTTCAATGTCGTGCTCACGGTGAAGATGGAGTGGCAATTAGGGTATCAGGATCCCTTATTATTGGGAATCAGTTTCTTATATGTGGAGATGGCATTCAAGTAGAGGGCTTGCCAAATTTTAAGGACCTTGGGATTGATATTTCTAGCAAGCGAATGGGTACATTTCACGAACAGTTTATCATGGAACCAGCCAATGTCATTGGACGCTACTTCATAGCCAAACAAGAGCTGTACATAAACCAGTA 1556 0.4081 MAGLEELKKKLAPLFDAEKGFSTGSTLDPCDSYTLSDGGTVNLLSRSYGVYNINELGLQKCTSRSVDETDHSEKTYRCASHEMRVFGAIGSGASSVVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYQGLVEFHGAFYVPDSGQISIALEYMDGGSLADILRMHKRIPEPVLSSMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLSLLECGTGEFPYTANEGPVNLMLQILDDPSPTPTKHNFSPEFCSFVDACLQKDPDARPTADQLLLHPFITKYEKAQVDLAGFVRSVFDPTQRLKDLADMLTIHYYLLFDGPDALWQHTRNLYNESSTFSFSGKEHLGPNDIFTTTSSIRSTLIGDWPPEKLVHVVEKLQCRAHGEDGVAIRVSGSLIIGNQFLICGDGIQVEGLPNFKDLGIDISSKRMGTFHEQFIMEPANVIGRYFIAKQELYINQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00420 518 SUPERFAMILY NTF2-like 364 516 IPR032710 -
Bva03g00420 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bva03g00420 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Bva03g00420 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00420 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Bva03g00420 518 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00420 518 SUPERFAMILY Protein kinase-like (PK-like) 86 369 IPR011009 -
Bva03g00420 518 Gene3D Phosphorylase Kinase; domain 1 54 164 - -
Bva03g00420 518 CDD PKc_MAPKK_plant_like 80 344 - -
Bva03g00420 518 Gene3D - 364 517 - -
Bva03g00420 518 Pfam Protein kinase domain 86 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00420 518 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 517 - -
Bva03g00420 518 Gene3D Transferase(Phosphotransferase) domain 1 165 363 - -
Bva03g00420 518 PANTHER - 2 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00420 Bva-Chr3 2439446 2443114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00420 30 518 MAP Kinase Kinase Gene Family AT5G40440 79.959 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bva03g00420 Pkinase 2.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00420 K20607 - gmx:100784935 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00420 03 2439446 2443114 Bva03g00420 03 2439446 2443114 ECH