Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00408 ATGGAGTCATCTGTTAATGGAGCTGAGTCTTTAGCAGAGGATCAGAATTCAGTTTCTGCTGTGGCACAAGATCTTCCTTCAACGTCAGAGACACCACGGCCTTCCCGCCCTCCCCTCAGATCATCTAGAAATCACGTGGCTTCTTCCACATCCCATTTGACTGGTCATCATAATTATGGCAATGCAACCCtgggtggtggtggtggtggtggtgttCTCAATAAAACAGGAGAAAGTAGTTCAAGGAAGAATGTCTCTGCAATGGATACAAATGGCATGTTGGAATCTGAGAGCTTTGTCATAGGCTCTTCTAAAGGACGTATTGATCAAACAAAGGGTTGCTGTCAGTCAGAGGTTACTTTTTGTCCAAGTCCTCAGAATAGCGTCTATTCTACTACTGCCTATTCAGAAGCCAAACAGAGTTTCACCAATACTGAAGTCAGTGAATGTGTTAGTGTTGATAAGTCAGGTGAAAGTTGTGAAGTTACTAATTCCTGTGATTTTAATGAGAGCAGGAAGACAAGCATATGTAGAGGGAGTACTGGAAGTGATGTTAGTGATGAGAGCAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCCATTCGAGCTCGTGATGGGATGTTAGAAATGAGACATTTCAGGTTAATGAAGAAATTGGGATGTGGAGACATAGGAAGTGTTTATCTAGCAGAGTTGTCTGGCGCAAGAACTAATTTTGCCATGAAGGTTATGGATAAAACAGAGTTGGCAAGGCGCAAGAAGCTTCTGAGGGTTCAGACAGAAAGAGAGATATTACAGTCACTGGATCATCCTTTTCTACCAACATTGTATACACACTTTGAGACAGAAACATTCTCGTGCTTGGTAATGGAATTCTGCCCTGGTGGAGACCTGCATGCACTCCGGCAAAGACAGCCTGGGAAATGTTTTTCAGAGCAGGCTGCCAGGTTTTATGTAGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATTATATACAGAGACCTTAAGCCTGAGAATGTGTTGGTTAGAGAAGATGGCCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCGCTGTCAGCCCAACTCTAGTGAAGTCATCAAACCTGAACTCCGAGAATAAAAGCTCAGGATATTGCATTCAACCTGCTTGCATTGAACCAACCTGTGTGATGCAGCCAGATTGCATCCAACCTTCATGTTTTACACCGCGTTTTCTATCTGGAAAatccaagaaagaaaagaagtataaTCCAAAGAATGAAATGCATAATCAGGTAACCCCTCTCCCTGAGCTCATTGCTGAGCCCACAAATGCCCGGTCAATGTCCTTTGTGGGTACACATGAGTACTTGGCACCTGAAATTATTAAAGGTGAAGGGCATGGCAGTGCTGTAGATTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGTAGGACACCATTTAAGGGTTCAGTGAATCGAGCAACTCTGTTTAATGTGGTTGGCCAGCCCTTGAGATTTCCAGAATCCCCTACCGTCAGCTTTGCTGCCAGGGACTTGATCAGGGGTTTGCTCGTGAAAGAGCCCCAGCATCGTCTTGCTTATAGACGTGGAGCTACAGAAGTTAAACAGCATCCATTCTTTCAGAATGTGAATTGGGCACTGATCCGTTGTGCAAATCCTCCGGAGGTGCCTAGACAAGCCATGAGAGCACTTGCAACTGAAAAGGTGCCTGGTGTGAAGCCTTCTGGTAACTATTTGGATATTGAATTCTTTTG 1826 0.4283 MESSVNGAESLAEDQNSVSAVAQDLPSTSETPRPSRPPLRSSRNHVASSTSHLTGHHNYGNATLGGGGGGGVLNKTGESSSRKNVSAMDTNGMLESESFVIGSSKGRIDQTKGCCQSEVTFCPSPQNSVYSTTAYSEAKQSFTNTEVSECVSVDKSGESCEVTNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRARDGMLEMRHFRLMKKLGCGDIGSVYLAELSGARTNFAMKVMDKTELARRKKLLRVQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKCFSEQAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNLNSENKSSGYCIQPACIEPTCVMQPDCIQPSCFTPRFLSGKSKKEKKYNPKNEMHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSVNRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEVKQHPFFQNVNWALIRCANPPEVPRQAMRALATEKVPGVKPSGNYLDIEFF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00408 608 Gene3D Phosphorylase Kinase; domain 1 226 310 - -
Bva03g00408 608 MobiDBLite consensus disorder prediction 1 90 - -
Bva03g00408 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Bva03g00408 608 Gene3D Transferase(Phosphotransferase) domain 1 311 408 - -
Bva03g00408 608 Gene3D Transferase(Phosphotransferase) domain 1 458 582 - -
Bva03g00408 608 PANTHER FLIPPASE KINASE 1-RELATED 81 608 - -
Bva03g00408 608 CDD STKc_phototropin_like 225 584 - -
Bva03g00408 608 MobiDBLite consensus disorder prediction 1 58 - -
Bva03g00408 608 SUPERFAMILY Protein kinase-like (PK-like) 204 584 IPR011009 -
Bva03g00408 608 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 81 608 - -
Bva03g00408 608 ProSiteProfiles Protein kinase domain profile. 227 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00408 608 Pfam Protein kinase domain 228 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00408 608 Pfam Protein kinase domain 461 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00408 608 MobiDBLite consensus disorder prediction 74 90 - -
Bva03g00408 608 SMART serkin_6 227 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00408 Bva-Chr3 2326031 2330127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00408 132 608 AGC Kinase Gene Family AT5G47750 70.909 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva03g00408 Pkinase 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00408 K08286 - gmx:100802402 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00408 03 2326031 2330127 Bva03g00408 03 2326031 2330127 ECH